RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 TTC1Q99614 292 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 SEMA4AQ9H3S1 761 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 C6orf106Q9H6K1 298 aaPredicted RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 IL26Q9NPH9 171 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 PIH1D1Q9NWS0 290 aaKnown RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 SYBUQ9NX95 663 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 ZC3H7BQ9UGR2 993 aaKnown RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 GGT7Q9UJ14 662 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 NFU1Q9UMS0 254 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 MAD1L1Q9Y6D9 718 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 RPS6KL1Q9Y6S9 549 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 GLYATL1P3A0A0U1RQE8 302 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 AGAP14A8MT82 685 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PRR5-ARHGAP8B1AHC4 643 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 FPGTO14772 594 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 CTIFO43310 598 aaKnown RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 HRO43593 1189 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 MAGEC1O60732 1142 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 FSBPO95073 299 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 BPIP17213 487 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PHBP35232 272 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 TRIM23P36406 574 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 ETV3P41162 512 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 MAGEA4P43358 317 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 YPEL5P62699 121 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PPP2CBP62714 309 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 RACK1P63244 317 aaKnown RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 PPP2CAP67775 309 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 LONRF1Q17RB8 773 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 KCTD19Q17RG1 926 aaPredicted RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 WSCD2Q2TBF2 565 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PLK5Q496M5 336 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 MSS51Q4VC12 460 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 AARS2Q5JTZ9 985 aaKnown RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 HENMT1Q5T8I9 393 aaKnown RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 STEAP4Q687X5 459 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PMS2CLQ68D20 193 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 DENND2CQ68D51 928 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PNCKQ6P2M8 343 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 AFTPHQ6ULP2 937 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 ADAMTSL4Q6UY14 1074 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 CEP68Q76N32 757 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 TRMT10CQ7L0Y3 403 aaKnown RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 SNX20Q7Z614 316 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PALM2Q8IXS6 379 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 ZBED8Q8IZ13 594 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 FAM160A2Q8N612 972 aaPredicted RBP9.44□□□□□ -0.9
CLN8-203ENST00000518780 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLN8-203ENST00000518780 FBXO36Q8NEA4 188 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 MYRIPQ8NFW9 859 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 OR13J1Q8NGT2 312 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLN8-203ENST00000518780 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 ULK4Q96C45 1275 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 VPS35Q96QK1 796 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 SMIM14Q96QK8 99 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 TCF12Q99081 682 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 HINFPQ9BQA5 517 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 PARD6BQ9BYG5 372 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 ABCG8Q9H221 673 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 SAYSD1Q9NPB0 183 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 CD93Q9NPY3 652 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 SMOXQ9NWM0 555 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 SUSD2Q9UGT4 822 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 SLC30A1Q9Y6M5 507 aa9.44□□□□□ -0.9
CLN8-203ENST00000518780 ZCWPW2A0A1B0GU75 182 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 PRR23AA6NEV1 266 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 MEI4A8MW99 385 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 F8W8V4 182 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 SLC31A1O15431 190 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 SRP72O76094 671 aaKnown RBP9.43□□□□□ -0.9
CLN8-203ENST00000518780 GNSP15586 552 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 GM2AP17900 193 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 ITGALP20701 1170 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 KELP23276 732 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 NMBRP28336 390 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 GPR1P46091 355 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 CRADDP78560 199 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 XIAPP98170 497 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 SEMG2Q02383 582 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 CACNG1Q06432 222 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 NFATC2Q13469 925 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 SIM2Q14190 667 aaPredicted RBP9.43□□□□□ -0.9
CLN8-203ENST00000518780 FGL2Q14314 439 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 STAT4Q14765 748 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 CRYMQ14894 314 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 BRD3Q15059 726 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 PTPRRQ15256 657 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 LYSMD4Q5XG99 296 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 MRNIPQ6NTE8 343 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 SDCCAG8Q86SQ7 713 aaPredicted RBP9.43□□□□□ -0.9
CLN8-203ENST00000518780 CCDC25Q86WR0 208 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 AGGF1Q8N302 714 aaeCLIP9.43□□□□□ -0.9
CLN8-203ENST00000518780 MFSD2AQ8NA29 543 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 TP53I13Q8NBR0 393 aaPredicted RBP9.43□□□□□ -0.9
CLN8-203ENST00000518780 TMEM145Q8NBT3 493 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 GPR26Q8NDV2 337 aa9.43□□□□□ -0.9
CLN8-203ENST00000518780 OR13C4Q8NGS5 318 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms