RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RPS5P46782 204 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 LIMK1P53667 647 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RCAN1P53805 252 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 EPHB3P54753 998 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RNASE9P60153 205 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 YWHAEP62258 255 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 UBE2IP63279 158 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF45Q02386 682 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 GALNT2Q10471 571 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SNTA1Q13424 505 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ADAM15Q13444 863 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RIN1Q13671 783 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 COTL1Q14019 142 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CAPRIN1Q14444 709 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PDK1Q15118 436 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PDK2Q15119 407 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 VPS72Q15906 364 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP1B1Q16678 543 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 DDR2Q16832 855 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF827Q17R98 1081 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 EPC2Q52LR7 807 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCNYL2Q5T2Q4 361 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 GPR107Q5VW38 600 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PDPK2PQ6A1A2 396 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SDE2Q6IQ49 451 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PYHIN1Q6K0P9 492 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 HMBOX1Q6NT76 420 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 C3orf33Q6P1S2 294 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF530Q6P9A1 599 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CRTC3Q6UUV7 619 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 KDELC1Q6UW63 502 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZDHHC24Q6UX98 284 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RNF207Q6ZRF8 634 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RRM2BQ7LG56 351 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 KRT26Q7Z3Y9 468 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRSS42Q7Z5A4 293 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 NOXA1Q86UR1 476 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 COMTD1Q86VU5 262 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC22A16Q86VW1 577 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 JAZF1Q86VZ6 243 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CARM1Q86X55 608 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CATSPER3Q86XQ3 398 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 P3H2Q8IVL5 708 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 MAPKAPK5Q8IW41 473 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARHGEF19Q8IW93 802 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC60Q8IWA6 550 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CHERPQ8IWX8 916 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SYTL1Q8IYJ3 562 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 THNSL1Q8IYQ7 743 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CLIP4Q8N3C7 705 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLD5Q8N7P1 536 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR52N1Q8NH53 320 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SETD6Q8TBK2 473 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF606Q8WXB4 792 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PYDC1Q8WXC3 89 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 P2RX5Q93086 422 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PHKBQ93100 1093 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 YIPF5Q969M3 257 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB7BQ96AH8 199 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPWD1Q96BP3 646 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 VPS39Q96JC1 886 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZC3H10Q96K80 434 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF597Q96LX8 424 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPP3R2Q96LZ3 170 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM227BQ96M60 508 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 TCEANC2Q96MN5 208 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SERPINB11Q96P15 392 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 TCEAL7Q9BRU2 100 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM213AQ9BRX8 229 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC106Q9BWC9 280 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMEM120AQ9BXJ8 343 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC12A5Q9H2X9 1139 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 MROH8Q9H579 483 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 NIPAL2Q9H841 368 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 GP6Q9HCN6 339 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 NECTIN3Q9NQS3 549 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RGS18Q9NS28 235 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ACOXLQ9NUZ1 547 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 DNAJC28Q9NX36 388 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 GGA3Q9NZ52 723 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SMARCAL1Q9NZC9 954 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CD300AQ9UGN4 299 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANAPC2Q9UJX6 822 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF214Q9UL59 606 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAB23Q9ULC3 237 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ENTPD4Q9Y227 616 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 DTX4Q9Y2E6 619 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SNX24Q9Y343 169 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF451Q9Y4E5 1061 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAD54BQ9Y620 910 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CDY2AQ9Y6F7 541 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 A3GALT2U3KPV4 340 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PMF1-BGLAPU3KQ54 211 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZCCHC11Q5TAX3 1644 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PSME4Q14997 1843 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 N4BP2Q86UW6 1770 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 C10orf71Q711Q0 1435 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 PFASO15067 1338 aa4.8□□□□□ -1.64
HMGB1P19-201ENST00000517578 CLUHO75153 1309 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms