RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 B4GALNT1Q00973 533 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TFAP4Q01664 338 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRKCQQ04759 706 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 CXCL9Q07325 125 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 IL24Q13007 206 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TSTA3Q13630 321 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 DRAP1Q14919 205 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 MAPK11Q15759 364 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 PKN1Q16512 942 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ST3GAL2Q16842 350 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZXDCQ2QGD7 858 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 CCDC57Q2TAC2 916 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 PLEKHN1Q494U1 663 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 GAGE13Q4V321 117 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 CFAP157Q5JU67 520 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 RNASEH2BQ5TBB1 312 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRAMEF8Q5VWM4 474 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SLC27A1Q6PCB7 646 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM88Q6PEY1 159 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 MACC1Q6ZN28 852 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM182Q6ZP80 229 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TAS2R42Q7RTR8 314 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF410Q86VK4 478 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 NUDT13Q86X67 352 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 RFX6Q8HWS3 928 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SPATA2LQ8IUW3 424 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ARID3BQ8IVW6 561 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 PDCL2Q8N4E4 241 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 AMER2Q8N7J2 671 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 FAM133AQ8N9E0 248 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 EIF1ADQ8N9N8 165 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SRFBP1Q8NEF9 429 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 OR52K1Q8NGK4 314 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 OR10S1Q8NGN2 331 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 OR14K1Q8NGZ2 314 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF483Q8TF39 744 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 GDPD5Q8WTR4 605 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SLC9A6Q92581 669 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 LPPQ93052 612 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SPSB1Q96BD6 273 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SHISA4Q96DD7 197 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ARSGQ96EG1 525 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 CCDC51Q96ER9 411 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 KLHL5Q96PQ7 755 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 BBS4Q96RK4 519 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 CDK5RAP1Q96SZ6 601 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 GPHA2Q96T91 129 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 NAP1L3Q99457 506 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ABHD6Q9BV23 337 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 NFKBIZQ9BYH8 718 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM117Q9H0C3 514 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM168Q9H0V1 697 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 FZD8Q9H461 694 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 LRRC40Q9H9A6 602 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 RPF1Q9H9Y2 349 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 EPB41L5Q9HCM4 733 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TCF7L2Q9NQB0 619 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ENTPD7Q9NQZ7 604 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 FAM212BQ9NTI7 297 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM161AQ9NX61 479 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SMPD3Q9NY59 655 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 NLKQ9UBE8 527 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 POLLQ9UGP5 575 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SUN2Q9UH99 717 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SLC24A2Q9UI40 661 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 GABRQQ9UN88 632 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 DHDHQ9UQ10 334 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TRAF3IP3Q9Y228 551 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 RAD54L2Q9Y4B4 1467 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 C13orf42A0A1B0GVH6 325 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR6C68A6NDL8 312 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 WIPF3A6NGB9 483 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 C5orf52A6NGY3 159 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZSCAN5BA6NJL1 495 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SDR42E2A6NKP2 422 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 DRGXA6NNA5 263 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 NPIPB11E5RHQ5 1161 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 L7N2F9 121 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PSMD9O00233 223 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PLK4O00444 970 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 OGG1O15527 345 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SELENOFO60613 162 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 RSL1D1O76021 490 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SUN1O94901 812 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TFP02787 698 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ERBB2P04626 1255 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TPM1P09493 284 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 LINGO3P0C6S8 592 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 HOXB9P17482 250 aaPredicted RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 NR1D1P20393 614 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ITGAXP20702 1163 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 DRD4P21917 467 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 HNRNPA2B1P22626 353 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 FRKP42685 505 aaPredicted RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CHRNA4P43681 627 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CENPAP49450 140 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARSEP51690 589 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLCNKBP51801 687 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CHN2P52757 468 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms