RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 SCTRP47872 440 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KCNC1P48547 511 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TTPAP49638 278 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCNHP51946 323 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KPNA2P52292 529 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SLC12A2P55011 1212 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DNAJB13P59910 316 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PFKPQ01813 784 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PTSQ03393 145 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CACNG1Q06432 222 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RAD51Q06609 339 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ACTN3Q08043 901 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HYAL1Q12794 435 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BNIP1Q12981 228 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ITGA9Q13797 1035 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CSHL1Q14406 222 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ACAP2Q15057 778 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PTPRNQ16849 979 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GEN1Q17RS7 908 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FAM83EQ2M2I3 478 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TECRLQ5HYJ1 363 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RARS2Q5T160 578 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RNF187Q5TA31 235 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LIPMQ5VYY2 423 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TRIM68Q6AZZ1 485 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PSAPL1Q6NUJ1 521 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ANKRD54Q6NXT1 300 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CRTC1Q6UUV9 634 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CERS6Q6ZMG9 384 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZCCHC23Q6ZST2 131 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TPRG1Q6ZUI0 275 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TBC1D1Q86TI0 1168 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ISCA2Q86U28 154 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C12orf40Q86WS4 652 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CRLF3Q8IUI8 442 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NAT16Q8N8M0 369 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TXNDC5Q8NBS9 432 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CHST14Q8NCH0 376 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TTC8Q8TAM2 541 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BPIFB1Q8TDL5 484 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HCAR2Q8TDS4 363 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 WFIKKN2Q8TEU8 576 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ANKRD49Q8WVL7 239 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SCRN2Q96FV2 425 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 THOC1Q96FV9 657 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ABHD8Q96I13 439 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TSNARE1Q96NA8 513 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LRRC37BQ96QE4 947 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SIKE1Q9BRV8 207 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GATA5Q9BWX5 397 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GPR63Q9BZJ6 419 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DRC3Q9H069 523 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MYLK2Q9H1R3 596 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 S1PR5Q9H228 398 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MRPL46Q9H2W6 279 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ACTR5Q9H9F9 607 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SLC28A3Q9HAS3 691 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZFYVE1Q9HBF4 777 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BPIFA1Q9NP55 256 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 IL26Q9NPH9 171 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CPSF2Q9P2I0 782 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DCTN4Q9UJW0 460 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PKP3Q9Y446 797 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 COMMD10Q9Y6G5 202 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OAS3Q9Y6K5 1087 aaKnown RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NUMBLQ9Y6R0 609 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 WASF2Q9Y6W5 498 aa5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MUC22E2RYF6 1773 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PCM1Q15154 2024 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 A0A0G2JND7 137 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C1orf232A0A0U1RR37 186 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCDC189A1A4V9 331 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NPIPB15A6NHN6 443 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TTC34A8MYJ7 566 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RFXAPO00287 272 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PFDN6O15212 129 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LINC01565O15544 149 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OR1I1O60431 355 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NPHS1O60500 1241 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TULP3O75386 442 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LYPLA1O75608 230 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SRP72O76094 671 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NFATC1O95644 943 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ESR1P03372 595 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ATP5BP06576 529 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 T-ENOLP0DO92 83 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PKMP14618 531 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CD1DP15813 335 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TIMP2P16035 220 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF37AP17032 561 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BPIP17213 487 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RPS3P23396 243 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ATP5F1P24539 256 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FMO4P31512 558 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CA5AP35218 305 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SERPINB5P36952 375 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SKIV2L2P42285 1042 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms