RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RPIAP49247 311 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 DCDC1P59894 354 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 OTUD4Q01804 1114 aaKnown RBP12.74□□□□□ -0.37
CLCN3-210ENST00000515420 MPP3Q13368 585 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 PTPRRQ15256 657 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 DEFB133Q30KQ1 61 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 ITPRIPL1Q6GPH6 555 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 DHRS13Q6UX07 377 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 PID1Q7Z2X4 250 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 PELI3Q8N2H9 469 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 SPATA22Q8NHS9 363 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 OR1E3Q8WZA6 343 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 NAT6Q93015 286 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
CLCN3-210ENST00000515420 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 HERPUD2Q9BSE4 406 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 LGR4Q9BXB1 951 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 ABCG8Q9H221 673 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 GBA3Q9H227 469 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 ZFYVE1Q9HBF4 777 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 SLC17A4Q9Y2C5 497 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 FRYQ5TBA9 3013 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 MYLKQ15746 1914 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 EME2A4GXA9 379 aaPredicted RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 YY2O15391 372 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 ANXA9O76027 345 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 CEACAM5P06731 702 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 PROS1P07225 676 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 IVLP07476 585 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 RBP3P10745 1247 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 RBL1P28749 1068 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 EIF3EP60228 445 aaKnown RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 KLF1Q13351 362 aaPredicted RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 GALNT3Q14435 633 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 NR0B2Q15466 257 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 HENMT1Q5T8I9 393 aaKnown RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 KDELC1Q6UW63 502 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 B4GALNT4Q76KP1 1039 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 RD3Q7Z3Z2 195 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 SCARF2Q96GP6 870 aaPredicted RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 TRABDQ9H4I3 376 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 CAAP1Q9H8G2 361 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 TRNAU1APQ9NX07 287 aaKnown RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 GUCA1BQ9UMX6 200 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 DOLKQ9UPQ8 538 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 ZNF711Q9Y462 761 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 MAP1BP46821 2468 aaKnown RBP12.73□□□□□ -0.37
CLCN3-210ENST00000515420 ASXL3Q9C0F0 2248 aa12.73□□□□□ -0.37
CLCN3-210ENST00000515420 ZFC3H1O60293 1989 aaKnown RBP12.72□□□□□ -0.37
CLCN3-210ENST00000515420 AKAP13Q12802 2813 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 A0A0U1RQS6 177 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 GOLGA6CA6NDK9 693 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 GOLGA6BA6NDN3 693 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 PMPCBO75439 489 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 GOLGA6DP0CG33 693 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 HLA-DPA1P20036 260 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 GEMP55040 296 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 WNT3AP56704 352 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 C1orf61Q13536 156 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 PEX6Q13608 980 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 PCSK7Q16549 785 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 LYSMD3Q7Z3D4 306 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 TMC3Q7Z5M5 1100 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 SLC35F3Q8IY50 421 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 ARL10Q8N8L6 244 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
CLCN3-210ENST00000515420 OR6C4Q8NGE1 309 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 WDR48Q8TAF3 677 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 COX14Q96I36 57 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 MRGPRX2Q96LB1 330 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 ALS2CR12Q96Q35 445 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 WDR24Q96S15 920 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 RIOK2Q9BVS4 552 aaKnown RBP12.72□□□□□ -0.37
CLCN3-210ENST00000515420 FAM83DQ9H4H8 585 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 CYP4F12Q9HCS2 524 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 GOLGA6AQ9NYA3 693 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 HACD3Q9P035 362 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 VPS18Q9P253 973 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 DKK4Q9UBT3 224 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 CD84Q9UIB8 345 aa12.72□□□□□ -0.37
CLCN3-210ENST00000515420 RP1P56715 2156 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 C1QTNF9BB2RNN3 333 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 FGF1P05230 155 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 PTMAP06454 111 aaKnown RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 CELA2BP08218 269 aaPredicted RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 C1QTNF9P0C862 333 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 HMGCLP35914 325 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 CCZ1BP86790 482 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 CCZ1P86791 482 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms