RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PRRC2BQ5JSZ5 2229 aaKnown RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 A8MT66 165 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 GRXCR1A8MXD5 290 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 PER2O15055 1255 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 IPO13O94829 963 aaKnown RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 KRT16P08779 473 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 TYRP14679 529 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 CD1DP15813 335 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 CD9P21926 228 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 CALB2P22676 271 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 MPSTP25325 297 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 PTPN4P29074 926 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 SERPINA4P29622 427 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 CDKN1CP49918 316 aaPredicted RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 SULT2A1Q06520 285 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 PDAP1Q13442 181 aaKnown RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 DMC1Q14565 340 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 TTC31Q49AM3 519 aaPredicted RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 ZNF697Q5TEC3 545 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 FAM109BQ6ICB4 259 aaPredicted RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 ELMSAN1Q6PJG2 1045 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 PACS2Q86VP3 889 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 PCDH20Q8N6Y1 951 aaKnown RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 STON2Q8WXE9 905 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 SGF29Q96ES7 293 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 BIRC8Q96P09 236 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 CCDC106Q9BWC9 280 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 CCDC68Q9H2F9 335 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 LINC00597Q9H2U6 94 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 TLE6Q9H808 572 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 TAS2R13Q9NYV9 303 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 ARMCX1Q9P291 453 aa14.9□□□□□ -0.02
VCAN-211ENST00000513984 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.9□□□□□ -0.02
VCAN-211ENST00000513984 A0A0U1RQS6 177 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 NEMP2A6NFY4 417 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CAPN8A6NHC0 703 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 MATN2O00339 956 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 MGRN1O60291 552 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 SRP72O76094 671 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 RHOBTB1O94844 696 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 PAPLNO95428 1278 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 KCNA5P22460 613 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 FMO4P31512 558 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 GKP32189 559 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 RPL14P50914 215 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 ADARP55265 1226 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 ERVK-21P61565 698 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CACNG1Q06432 222 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 GPM6BQ13491 265 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CDKN3Q16667 212 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 SETMARQ53H47 684 aaPredicted RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 ZRANB3Q5FWF4 1079 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 LY6G5CQ5SRR4 150 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 EPGNQ6UW88 154 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 TRIM67Q6ZTA4 783 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 KIAA0907Q7Z7F0 614 aaPredicted RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 SLC22A9Q8IVM8 553 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ECHDC3Q96DC8 303 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 MOCOSQ96EN8 888 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CNDP1Q96KN2 507 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 LYSMD1Q96S90 227 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CPEB1Q9BZB8 566 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 COG4Q9H9E3 785 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 KLC4Q9NSK0 619 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 KIF26AQ9ULI4 1882 aaPredicted RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 ANKRD12Q6UB98 2062 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CHD9Q3L8U1 2897 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 F8W8V4 182 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ZBTB14O43829 449 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CCR10P46092 362 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ALDH18A1P54886 795 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 NFKB2Q00653 900 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 PTPRNQ16849 979 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 MYLK3Q32MK0 819 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 CFAP157Q5JU67 520 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 C9orf50Q5SZB4 431 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ZSWIM9Q86XI8 627 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 TREML1Q86YW5 311 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ADGRG2Q8IZP9 1017 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 STK40Q8N2I9 435 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 RHEBL1Q8TAI7 183 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ING5Q8WYH8 240 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 UTP4Q969X6 686 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 PTERQ96BW5 349 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 HTATIP2Q9BUP3 242 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 SLC2A11Q9BYW1 496 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ALG9Q9H6U8 611 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ZFYVE1Q9HBF4 777 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 SYTL2Q9HCH5 934 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 ACSS2Q9NR19 701 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 COMMD10Q9Y6G5 202 aa14.89□□□□□ -0.03
VCAN-211ENST00000513984 OAS3Q9Y6K5 1087 aaKnown RBP14.89□□□□□ -0.03
VCAN-211ENST00000513984 C1orf232A0A0U1RR37 186 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 SLCO1B7G3V0H7 640 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 GAPDHSO14556 408 aaPredicted RBP14.88□□□□□ -0.03
VCAN-211ENST00000513984 SLC9A3R1O14745 358 aaPredicted RBP14.88□□□□□ -0.03
VCAN-211ENST00000513984 HDAC3O15379 428 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 BMP1P13497 986 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms