RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 AFF3P51826 1226 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 RACK1P63244 317 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 IRX4P78413 519 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 IL9RQ01113 521 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CDH17Q12864 832 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 MSLNQ13421 630 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DHX34Q14147 1143 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 INPP5AQ14642 412 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 STAT4Q14765 748 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 TPSAB1Q15661 275 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DUOXA1Q1HG43 343 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 KIF19Q2TAC6 998 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF542PQ5EBM4 170 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DNTTIP2Q5QJE6 756 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 RNASEH2BQ5TBB1 312 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 KCTD16Q68DU8 428 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DOK6Q6PKX4 331 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 FAM151BQ6UXP7 276 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 KYAT3Q6YP21 454 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 Q6ZSR6 202 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 TMC3Q7Z5M5 1100 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 ABI3BPQ7Z7G0 1075 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SPATS2Q86XZ4 545 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CBARPQ8N350 705 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 MPP5Q8N3R9 675 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 NAT8LQ8N9F0 302 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DENND6BQ8NEG7 585 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 OR4K2Q8NGD2 314 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CCHCR1Q8TD31 782 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 RUBCNQ92622 972 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CENPTQ96BT3 561 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 LRRC45Q96CN5 670 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 AP2M1Q96CW1 435 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DNAJC1Q96KC8 554 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 RUNDC3BQ96NL0 473 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 LENG8Q96PV6 779 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 C1QTNF7Q9BXJ2 289 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 IL21RQ9HBE5 538 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 CAPN10Q9HC96 672 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SEMA4GQ9NTN9 838 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SYBUQ9NX95 663 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 PKD2L2Q9NZM6 624 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SUSD2Q9UGT4 822 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 FKBPLQ9UIM3 349 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SNX24Q9Y343 169 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 SNX11Q9Y5W9 270 aa9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-209ENST00000513818 PI4KAP42356 2102 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ESYT3A0FGR9 886 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 LNP1A1A4G5 178 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 CTAGE15A4D2H0 777 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ERI2A8K979 691 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 STX7O15400 261 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 LDB2O43679 373 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 CTAGE8P0CG41 777 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PRSS56P0CW18 603 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ENGP17813 658 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 TGM1P22735 817 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 IVDP26440 423 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 NUDT1P36639 197 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 MAGEA6P43360 314 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 GPR1P46091 355 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF140P52738 457 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ITGA8P53708 1063 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 C21orf59P57076 290 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 NXPH1P58417 271 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PFN3P60673 137 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PDE1CQ14123 709 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 TEAD4Q15561 434 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 TRADDQ15628 312 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF648Q5T619 568 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 C8orf74Q6P047 294 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 CES3Q6UWW8 571 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 C4orf22Q6V702 233 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 LINC00523Q86TU6 105 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 CTAGE6Q86UF2 777 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 CAND1Q86VP6 1230 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 HEATR4Q86WZ0 1026 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 CTAGE4Q8IX94 777 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PPIL6Q8IXY8 311 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 AGGF1Q8N302 714 aaeCLIP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PNPLA1Q8N8W4 532 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ASB12Q8WXK4 309 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 KLHDC7BQ96G42 594 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF778Q96MU6 729 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 LRRC1Q9BTT6 524 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 EDEM2Q9BV94 578 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 LGR4Q9BXB1 951 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 WDR26Q9H7D7 661 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ARNT2Q9HBZ2 717 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 HACD3Q9P035 362 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 IL17CQ9P0M4 197 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 SLC2A6Q9UGQ3 507 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 FEZ2Q9UHY8 353 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 PNMA8BQ9ULN7 279 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 TPX2Q9ULW0 747 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms