RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 HOXD12P35452 270 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 HADHAP40939 763 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PTGER3P43115 390 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 NPY2RP49146 381 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SPINT3P49223 89 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 TUBB4BP68371 445 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC7A5Q01650 507 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PTSQ03393 145 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SGCGQ13326 291 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SEPT6Q14141 434 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 FGL2Q14314 439 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 LRRC14Q15048 493 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PTPRRQ15256 657 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 HIF1AQ16665 826 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 CDKN3Q16667 212 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 TEX35Q5T0J7 233 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 CERCAMQ5T4B2 595 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ZDHHC20Q5W0Z9 365 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 DENND2CQ68D51 928 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ESRP1Q6NXG1 681 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 Q6ZVL8 140 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ZNF765Q7L2R6 523 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 NLRP9Q7RTR0 991 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 HSD11B1LQ7Z5J1 315 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 TECPR1Q7Z6L1 1165 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 NRSN1Q8IZ57 195 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 RGL4Q8IZJ4 473 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 CBARPQ8N350 705 aaPredicted RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 DEFB119Q8N690 84 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 TP53I13Q8NBR0 393 aaPredicted RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PPHLN1Q8NEY8 458 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SEC14L1Q92503 715 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ATOH1Q92858 354 aaPredicted RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 KLK6Q92876 244 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PEX13Q92968 403 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 LOXL4Q96JB6 756 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 LENG8Q96PV6 779 aaPredicted RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PLEKHG4BQ96PX9 1271 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 MRM3Q9HC36 420 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM114A2Q9NRY5 505 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PIH1D1Q9NWS0 290 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 GRHL1Q9NZI5 618 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 IL17CQ9P0M4 197 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SUSD2Q9UGT4 822 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 EIF2B4Q9UI10 523 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ANAPC5Q9UJX4 755 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 RIMKLBQ9ULI2 386 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PKP3Q9Y446 797 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 TCAF1Q9Y4C2 921 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ASCC3Q8N3C0 2202 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 BPTFQ12830 3046 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM186AA6NE01 2351 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 A0A0U1RQS6 177 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 MROH6A6NGR9 719 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 H7C0S8 307 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 FPGTO14772 594 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 AURKAO14965 403 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 TP73O15350 636 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 STX7O15400 261 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 LDB2O43679 373 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 EPN2O95208 641 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 PYGLP06737 847 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 GNSP15586 552 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 TSHRP16473 764 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 TPH1P17752 444 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ITPKAP23677 461 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 MGAT1P26572 445 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SPAM1P38567 509 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ETV3P41162 512 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 NBL1P41271 181 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ZNF140P52738 457 aaPredicted RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ARL4CP56559 192 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SESN2P58004 480 aaPredicted RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 RACK1P63244 317 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 GUCY2DQ02846 1103 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 DPTQ07507 201 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 MTM1Q13496 603 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 IRF4Q15306 451 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 NR6A1Q15406 480 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SKIDA1Q1XH10 827 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 PCID2Q5JVF3 399 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 HENMT1Q5T8I9 393 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 LAIR1Q6GTX8 287 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 KYAT3Q6YP21 454 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 RABEPKQ7Z6M1 372 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 CAND1Q86VP6 1230 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 NLRP8Q86W28 1048 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SYT12Q8IV01 421 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 PDIK1LQ8N165 341 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 TMEM145Q8NBT3 493 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 LRRN4CLQ8ND94 238 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 OR4K2Q8NGD2 314 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 FBXO25Q8TCJ0 367 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 STYXQ8WUJ0 223 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 CENPTQ96BT3 561 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 AP2M1Q96CW1 435 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms