RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 AGAP2Q99490 1192 aa17.69■□□□□ 0.42
DDR1-272ENST00000513243 RIOK2Q9BVS4 552 aaKnown RBP17.69■□□□□ 0.42
DDR1-272ENST00000513243 GRPEL1Q9HAV7 217 aa17.69■□□□□ 0.42
DDR1-272ENST00000513243 MAGEE1Q9HCI5 957 aa17.69■□□□□ 0.42
DDR1-272ENST00000513243 FAM153AQ9UHL3 310 aa17.69■□□□□ 0.42
DDR1-272ENST00000513243 TRHDEQ9UKU6 1024 aa17.69■□□□□ 0.42
DDR1-272ENST00000513243 TPRP12270 2363 aaKnown RBP17.68■□□□□ 0.42
DDR1-272ENST00000513243 PTPRBP23467 1997 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 FAM149AA5PLN7 773 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 ACACBO00763 2458 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 FUCA1P04066 466 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 CEACAM5P06731 702 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 WNT3AP56704 352 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 C6orf132Q5T0Z8 1188 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 UNQ6494/PRO21346Q6UXR6 183 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 ADAMTSL4Q6UY14 1074 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 CDKL3Q8IVW4 592 aaPredicted RBP17.68■□□□□ 0.42
DDR1-272ENST00000513243 GALNT15Q8N3T1 639 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 CCHCR1Q8TD31 782 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 BOCQ9BWV1 1114 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 FRMD8Q9BZ67 464 aaPredicted RBP17.68■□□□□ 0.42
DDR1-272ENST00000513243 CYP4F12Q9HCS2 524 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 RSPH14Q9UHP6 348 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 MOSPD1Q9UJG1 213 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 SHOC2Q9UQ13 582 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 LRP4O75096 1905 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 CHD8Q9HCK8 2581 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 CEP295Q9C0D2 2601 aa17.68■□□□□ 0.42
DDR1-272ENST00000513243 LOC285095A0A1B0GVY8 99 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 PRSS38A1L453 326 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 CCDC175P0C221 793 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 POLD2P49005 469 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 DUSP3P51452 185 aaPredicted RBP17.67■□□□□ 0.42
DDR1-272ENST00000513243 KLF1Q13351 362 aaPredicted RBP17.67■□□□□ 0.42
DDR1-272ENST00000513243 CCDC70Q6NSX1 233 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 DARS2Q6PI48 645 aaKnown RBP17.67■□□□□ 0.42
DDR1-272ENST00000513243 LVRNQ6Q4G3 990 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 TMPRSS12Q86WS5 348 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 SLC35F3Q8IY50 421 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 SDR16C5Q8N3Y7 309 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 PTCD2Q8WV60 388 aaKnown RBP17.67■□□□□ 0.42
DDR1-272ENST00000513243 MRGPRX2Q96LB1 330 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 TMEM168Q9H0V1 697 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 FAM83DQ9H4H8 585 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 ZFYVE1Q9HBF4 777 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 USP29Q9HBJ7 922 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 LZTFL1Q9NQ48 299 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 PKD2L2Q9NZM6 624 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 DOLKQ9UPQ8 538 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 ZNF711Q9Y462 761 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 SPO11Q9Y5K1 396 aa17.67■□□□□ 0.42
DDR1-272ENST00000513243 PLXNB3Q9ULL4 1909 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 TCRBV7S2A1N4TA0A589 114 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 RGSL1A5PLK6 1076 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 KCNN4O15554 427 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 EPOP01588 193 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 PTMAP06454 111 aaKnown RBP17.66■□□□□ 0.42
DDR1-272ENST00000513243 PYGLP06737 847 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 E2F1Q01094 437 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 NR0B2Q15466 257 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 SIRPB2Q5JXA9 342 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 HENMT1Q5T8I9 393 aaKnown RBP17.66■□□□□ 0.42
DDR1-272ENST00000513243 HES3Q5TGS1 186 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 GUSBP11Q6P575 273 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 TMC3Q7Z5M5 1100 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 TRIM74Q86UV6 250 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 GKN2Q86XP6 184 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 IPMKQ8NFU5 416 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 CCL4L1Q8NHW4 92 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 SCG3Q8WXD2 468 aaKnown RBP17.66■□□□□ 0.42
DDR1-272ENST00000513243 HIC2Q96JB3 615 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 GORASP1Q9BQQ3 440 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 GBA3Q9H227 469 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 CARS2Q9HA77 564 aaKnown RBP17.66■□□□□ 0.42
DDR1-272ENST00000513243 EVA1BQ9NVM1 165 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 SLC17A4Q9Y2C5 497 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 TMEM98Q9Y2Y6 226 aa17.66■□□□□ 0.42
DDR1-272ENST00000513243 GOLGA4Q13439 2230 aaKnown RBP17.66■□□□□ 0.42
DDR1-272ENST00000513243 CPED1A4D0V7 1026 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 EME2A4GXA9 379 aaPredicted RBP17.65■□□□□ 0.42
DDR1-272ENST00000513243 GOLGA6L9A6NEM1 432 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 FADS2P1A8MWK0 482 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 AURKAO14965 403 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 INPP4BO15327 924 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 PROS1P07225 676 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 CHRNA4P43681 627 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 INSM1Q01101 510 aaPredicted RBP17.65■□□□□ 0.42
DDR1-272ENST00000513243 MPP3Q13368 585 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 ANKRD20A2Q5SQ80 823 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 ANKRD20A1Q5TYW2 823 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 DOK6Q6PKX4 331 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 TAF8Q7Z7C8 310 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 SLC25A41Q8N5S1 370 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 TTC13Q8NBP0 860 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 CCDC110Q8TBZ0 833 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 IFI44Q8TCB0 444 aa17.65■□□□□ 0.42
DDR1-272ENST00000513243 UBE2Q2Q8WVN8 375 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms