RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 V9GYQ6 96 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 DYTNA2CJ06 578 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 H3BN98 237 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PITPNM1O00562 1244 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MAGEB3O15480 346 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 F2P00734 622 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PLGP00747 810 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 SPATA31C1P0DKV0 1188 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 RPL17P18621 184 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 TFEBP19484 476 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PIK3R1P27986 724 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MAT2AP31153 395 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 SLC11A1P49279 550 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GPR17Q13304 367 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TRIP10Q15642 601 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SLC1A5Q15758 541 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PLA2G4EQ3MJ16 856 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GPR33Q49SQ1 333 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TEX44Q53QW1 395 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ADGRF1Q5T601 910 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PAOXQ6QHF9 649 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 BEND5Q7L4P6 421 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 KCNK18Q7Z418 384 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TMC3Q7Z5M5 1100 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GPR180Q86V85 440 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CAMKVQ8NCB2 501 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 LENG1Q96BZ8 264 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 ERP27Q96DN0 273 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PCED1BQ96HM7 432 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TPD52L3Q96J77 140 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 C12orf66Q96MD2 445 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 RETREG1Q9H6L5 497 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 INTS10Q9NVR2 710 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 ARHGAP20Q9P2F6 1191 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ADGRE2Q9UHX3 823 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 KLF15Q9UIH9 416 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FBXW2Q9UKT8 454 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TLR6Q9Y2C9 796 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 NOX1Q9Y5S8 564 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 B4DGG1 531 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MRASO14807 208 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MDM4O15151 490 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MATN3O15232 486 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CCND1P24385 295 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SOX11P35716 441 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 NUDT1P36639 197 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 BMPR1AP36894 532 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CTSOP43234 321 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 MANFP55145 182 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 NME5P56597 212 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MAXP61244 160 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 IRX1P78414 480 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 TBL3Q12788 808 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.24□□□□□ -1.731e-7■■□□□ 13.4
VCAN-209ENST00000513016 FNBP1LQ5T0N5 605 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 UNC5AQ6ZN44 842 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CHST15Q7LFX5 561 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 EXOC3L1Q86VI1 746 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TERB1Q8NA31 727 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ST13P5Q8NFI4 369 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 HHIPL1Q96JK4 782 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 HIST1H2AAQ96QV6 131 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SUV39H2Q9H5I1 410 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ALG9Q9H6U8 611 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PCDH18Q9HCL0 1135 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 LIMD1Q9UGP4 676 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TAGLN3Q9UI15 199 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 LEF1Q9UJU2 399 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 GGA2Q9UJY4 613 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GABRQQ9UN88 632 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 VWA7Q9Y334 891 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ASTN1O14525 1302 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CENPXA8MT69 81 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 NOL4O94818 638 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 C4BPAP04003 597 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 HAPLN1P10915 354 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 NR2C1P13056 603 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PFKLP17858 780 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 VIPR1P32241 457 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZNF132P52740 706 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PFKFB4Q16877 469 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SPDYCQ5MJ68 293 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CCNYL2Q5T2Q4 361 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZNF549Q6P9A3 640 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PIWIL4Q7Z3Z4 852 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 SNX32Q86XE0 403 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SLC41A1Q8IVJ1 513 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MPP5Q8N3R9 675 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZCCHC9Q8N567 271 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZNF461Q8TAF7 563 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FNIP1Q8TF40 1166 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 KLHL6Q8WZ60 621 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FIG4Q92562 907 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 DNAJC19Q96DA6 116 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 HERC2P3Q9BVR0 1158 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TTYH1Q9H313 450 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 B3GAT2Q9NPZ5 323 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MIOSQ9NXC5 875 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 HEY2Q9UBP5 337 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms