RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	CASP14	P31944	242 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	MTIF2	P46199	727 aa	Known RBP	12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	RGR	P47804	291 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SCNN1B	P51168	640 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	NDST2	P52849	883 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	HDAC4	P56524	1084 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	NOMO3	P69849	1222 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	NFATC2	Q13469	925 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SEMA5A	Q13591	1074 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SCYL2	Q6P3W7	929 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SLC9B2	Q86UD5	537 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	PLXDC1	Q8IUK5	500 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	RASGRP3	Q8IV61	690 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SRRM1	Q8IYB3	904 aa	Known RBP	12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	PYROXD2	Q8N2H3	581 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SFRP1	Q8N474	314 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	GALNT6	Q8NCL4	622 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SEC14L1	Q92503	715 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	CENPI	Q92674	756 aa	Predicted RBP	12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	EPB41L1	Q9H4G0	881 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SIX2	Q9NPC8	291 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	PLEKHM1	Q9Y4G2	1056 aa		12.5	□□□□□ -0.41
DDX41-215	ENST00000512431	SPTBN1	Q01082	2364 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431		A6NCN8	305 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	ARHGAP42	A6NI28	874 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	LRCH4	O75427	683 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	MT-ND3	P03897	115 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	PDGFA	P04085	211 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	MME	P08473	750 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	CYP2A6	P11509	494 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	KRT3	P12035	628 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	SLC2A4	P14672	509 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	TEAD1	P28347	426 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	VIPR1	P32241	457 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	ETV3	P41162	512 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	GPR1	P46091	355 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	EPHA4	P54764	986 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	AP1S1	P61966	158 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	LRP8	Q14114	963 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	RFTN1	Q14699	578 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	INPP5J	Q15735	1006 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	CNGA3	Q16281	694 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	NADK2	Q4G0N4	442 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	MARK2	Q7KZI7	788 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	TMEM135	Q86UB9	458 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	GALNT13	Q8IUC8	556 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	JOSD2	Q8TAC2	188 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	PTCD2	Q8WV60	388 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	MOCOS	Q96EN8	888 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	DTD2	Q96FN9	168 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	SLC25A23	Q9BV35	468 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	SARS2	Q9NP81	518 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	SLAMF7	Q9NQ25	335 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	CNOT8	Q9UFF9	292 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	PADI1	Q9ULC6	663 aa		12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	TEP1	Q99973	2627 aa	Known RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	12.49	□□□□□ -0.41
DDX41-215	ENST00000512431	TCP11X1	B4DZS4	312 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	PSMD11	O00231	422 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	TRAFD1	O14545	582 aa	Predicted RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	HEXIM1	O94992	359 aa	Known RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	NDUFA10	O95299	355 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	CLDN1	O95832	211 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	DES	P17661	470 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	GPD1	P21695	349 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	PAPOLA	P51003	745 aa	Known RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	RENBP	P51606	427 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	AIF1	P55008	147 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	TPI1	P60174	286 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	IL11RA	Q14626	422 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	PYCR3	Q53H96	274 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	CYB5D1	Q6P9G0	228 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	NOP9	Q86U38	636 aa	Known RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	THAP4	Q8WY91	577 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	SCARF2	Q96GP6	870 aa	Predicted RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	CELF6	Q96J87	481 aa	Known RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	SELENOO	Q9BVL4	669 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	LRRC19	Q9H756	370 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	SP110	Q9HB58	689 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	ACSS2	Q9NR19	701 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	G3BP2	Q9UN86	482 aa	Known RBP	12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	TMEM98	Q9Y2Y6	226 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	PCDHGA6	Q9Y5G7	932 aa		12.48	□□□□□ -0.41
DDX41-215	ENST00000512431	ANKRD62	A6NC57	917 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	DNAJB5	O75953	348 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	KIAA0754	O94854	1291 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	ASMTL	O95671	621 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	CP	P00450	1065 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	ANKRD34C	P0C6C1	535 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	ZNF28	P17035	718 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	MMP8	P22894	467 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	HTR7	P34969	479 aa		12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	GARS	P41250	739 aa	Known RBP	12.47	□□□□□ -0.41
DDX41-215	ENST00000512431	DPT	Q07507	201 aa		12.47	□□□□□ -0.41

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