RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 LNPEPQ9UIQ6 1025 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 GRM6O15303 877 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 NSUN2Q08J23 767 aaKnown RBP eCLIP14.85□□□□□ -0.03
PHF3-209ENST00000509330 KRT72Q14CN4 511 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 OR4D1Q15615 310 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 PFKFB4Q16877 469 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 PLEKHG6Q3KR16 790 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ARMC12Q5T9G4 340 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 RETSATQ6NUM9 610 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 AFTPHQ6ULP2 937 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 EPGNQ6UW88 154 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 ISCA2Q86U28 154 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 RDH11Q8TC12 318 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 SORCS1Q8WY21 1168 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 UBXN10Q96LJ8 280 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 DNAJC28Q9NX36 388 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 UTP6Q9NYH9 597 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 NKX1-2Q9UD57 310 aaPredicted RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 ASB3Q9Y575 518 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 C1orf232A0A0U1RR37 186 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 GRID2O43424 1007 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 SORBS2O94875 1100 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 RHOP08100 348 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ZNF37AP17032 561 aaPredicted RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 FDXRP22570 491 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 PGM1P36871 562 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 SESN3P58005 492 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 ASTLQ6HA08 431 aaPredicted RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 MRPL43Q8N983 215 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 CLP1Q92989 425 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 ZSWIM3Q96MP5 696 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 SLCO3A1Q9UIG8 710 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ZNF711Q9Y462 761 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 WNT6Q9Y6F9 365 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ATP6AP2A0A1C7CYW4 349 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 MATN2O00339 956 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ATP6AP2O75787 350 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 IPO13O94829 963 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 CLDN7O95471 211 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 CHRM3P20309 590 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 CLCN4P51793 760 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 BCL2L1Q07817 233 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 PPIGQ13427 754 aaKnown RBP eCLIP14.85□□□□□ -0.03
PHF3-209ENST00000509330 GEN1Q17RS7 908 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 POM121L1PQ3SYA9 428 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 MPPE1Q53F39 396 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 RALGPS1Q5JS13 557 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 HTR3DQ70Z44 454 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 TSPAN33Q86UF1 283 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ZSWIM9Q86XI8 627 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 C12orf76Q8N812 135 aaPredicted RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 WDR60Q8WVS4 1066 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 LPGAT1Q92604 370 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 AARSD1Q9BTE6 412 aaKnown RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 BBS2Q9BXC9 721 aa14.85□□□□□ -0.03
PHF3-209ENST00000509330 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
PHF3-209ENST00000509330 HDAC3O15379 428 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 CD1DP15813 335 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 UGT1A6P19224 532 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 UGT1A1P22309 533 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 UGT1A4P22310 534 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 UGT1A3P35503 534 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 UGT1A5P35504 534 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 BMPR1AP36894 532 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 SLC7A9P82251 487 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 PRKAA1Q13131 559 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 KPNB1Q14974 876 aaKnown RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 PTGR2Q8N8N7 351 aaPredicted RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 NSUN5Q96P11 429 aaKnown RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 RAD9AQ99638 391 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 MED16Q9Y2X0 877 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 CDC7O00311 574 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 GFRA2O00451 464 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 GFAPP14136 432 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 KPNA2P52292 529 aaKnown RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 PFKPQ01813 784 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 ACAP2Q15057 778 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 TSNQ15631 228 aaKnown RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 INO80DQ53TQ3 878 aaPredicted RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 FAM43BQ6ZT52 329 aaPredicted RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 ZNF366Q8N895 744 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 SPPL3Q8TCT6 385 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 GRIN3AQ8TCU5 1115 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 USP13Q92995 863 aaPredicted RBP14.84□□□□□ -0.03
PHF3-209ENST00000509330 BOCQ9BWV1 1114 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 APOL5Q9BWW9 433 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 MTG2Q9H4K7 406 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 PKP3Q9Y446 797 aa14.84□□□□□ -0.03
PHF3-209ENST00000509330 NPEPPSL1A6NEC2 478 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 TRAFD1O14545 582 aaPredicted RBP14.83□□□□□ -0.03
PHF3-209ENST00000509330 CYBBP04839 570 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 POLD2P49005 469 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 CREMQ03060 361 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 CUL3Q13618 768 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 FUT11Q495W5 492 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 TTC30BQ8N4P2 665 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 CLDN19Q8N6F1 224 aa14.83□□□□□ -0.03
PHF3-209ENST00000509330 DCBLD1Q8N8Z6 715 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms