RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 ATMQ13315 3056 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 MYLKQ15746 1914 aa7.52□□□□□ -1.2
CCSER1-208ENST00000509109 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 A0A087WV48 116 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 TMEM82A0PJX8 343 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 FAM170AA1A519 330 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 EIF3CLB5ME19 914 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 TAF4O00268 1085 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 KRIT1O00522 736 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 FFAR2O15552 330 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 RRP8O43159 456 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 POP4O95707 220 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 GP1BAP07359 652 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 UNGP13051 313 aaPredicted RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 FERP16591 822 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 DGKAP23743 735 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CFPP27918 469 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 EPHB2P29323 1055 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 DUSP3P51452 185 aaPredicted RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 SUOXP51687 545 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 ZNF143P52747 638 aaPredicted RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 THOP1P52888 689 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 COPB1P53618 953 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 HDAC4P56524 1084 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 YBEYP58557 167 aaPredicted RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CYP4F3Q08477 520 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 PTK2BQ14289 1009 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 GRM3Q14832 879 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 ZNF805Q5CZA5 627 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CFAP58Q5T655 872 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 SEL1L3Q68CR1 1132 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 DCUN1D2Q6PH85 259 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 GCNT7Q6ZNI0 430 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 PARS2Q7L3T8 475 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 KANSL1Q7Z3B3 1105 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 SLFN11Q7Z7L1 901 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 ZNF605Q86T29 641 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 NLRP14Q86W24 1093 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CILP2Q8IUL8 1156 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 RTL3Q8N8U3 475 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 GPT2Q8TD30 523 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 ASB12Q8WXK4 309 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 RFFLQ8WZ73 363 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CENPIQ92674 756 aaPredicted RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 ERGIC2Q96RQ1 377 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 EIF3CQ99613 913 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 NCAPGQ9BPX3 1015 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CNPY3Q9BT09 278 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 FZD3Q9NPG1 666 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 LMBRD1Q9NUN5 540 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 FANCLQ9NW38 375 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 DNAJC28Q9NX36 388 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 LIMA1Q9UHB6 759 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 IPO11Q9UI26 975 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 PPT2Q9UMR5 302 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CLCA2Q9UQC9 943 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 FADS3Q9Y5Q0 445 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 HS3ST3A1Q9Y663 406 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 CFAP46Q8IYW2 2715 aa7.52□□□□□ -1.21
CCSER1-208ENST00000509109 URB1O60287 2271 aaKnown RBP7.52□□□□□ -1.21
CCSER1-208ENST00000509109 TDRD6O60522 2096 aaKnown RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 SIGLEC16A6NMB1 481 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 C16orf96A6NNT2 1141 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 NOTOA8MTQ0 251 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ETV2O00321 342 aaPredicted RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 TOR1BO14657 336 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 BUB1O43683 1085 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 KDELR3O43731 214 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ZNF821O75541 412 aaPredicted RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 PIAS2O75928 621 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 RECKO95980 971 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 UGT2B4P06133 528 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 CKMT1AP12532 417 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 CHRNB2P17787 502 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 XPAP23025 273 aaPredicted RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 RFC1P35251 1148 aaPredicted RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ACVRL1P37023 503 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ABCG1P45844 678 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 KLK7P49862 253 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 RHOAP61586 193 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ELP6Q0PNE2 266 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 PTP4A2Q12974 167 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 TARDBPQ13148 414 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 COL28A1Q2UY09 1125 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 INO80DQ53TQ3 878 aaPredicted RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 CCDC183Q5T5S1 534 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ZCCHC8Q6NZY4 707 aaKnown RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 SCYL2Q6P3W7 929 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 GDPD4Q6W3E5 623 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ATG14Q6ZNE5 492 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 Q6ZSR6 202 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 CEP128Q6ZU80 1094 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 MON1BQ7L1V2 547 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 SLC22A18ASQ8N1D0 253 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 CCDC185Q8N715 623 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 DCBLD1Q8N8Z6 715 aa7.51□□□□□ -1.21
CCSER1-208ENST00000509109 ZNF548Q8NEK5 533 aaPredicted RBP7.51□□□□□ -1.21
CCSER1-208ENST00000509109 OR6K2Q8NGY2 324 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms