RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 A0A1W2PPE2 198 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 A0A1W2PR64 198 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 NPIPB15A6NHN6 443 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 C3orf70A6NLC5 250 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TRIM64CA6NLI5 447 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 LRRC53A6NM62 1247 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC38A8A6NNN8 435 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 KCNJ18B7U540 433 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 KIF28PB7ZC32 967 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TEX22C9J3V5 150 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 RTCAO00442 366 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 IPO8O15397 1037 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZBTB14O43829 449 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SYNCRIPO60506 623 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TAF5LO75529 589 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 GOSR1O95249 250 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZBTB11O95625 1053 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 GLUD1P00367 558 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 LCKP06239 509 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 IRF1P10914 325 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 FCGR1AP12314 374 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF12P17014 697 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ERCC2P18074 760 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 MCM3P25205 808 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 PRPHP41219 470 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 MATR3P43243 847 aaKnown RBP eCLIP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 GLUD2P49448 558 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 STAT2P52630 851 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 CDH8P55286 799 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 DLX5P56178 289 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 FOXL2P58012 376 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZP1P60852 638 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SEC61A1P61619 476 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 RBM6P78332 1123 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 OLR1P78380 273 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 EEF1A2Q05639 463 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 RNASELQ05823 741 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 AP1B1Q10567 949 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TEFQ10587 303 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 GRM4Q14833 912 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLMAPQ14BN4 828 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 NAA25Q14CX7 972 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF674Q2M3X9 581 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 MMEL1Q495T6 779 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 PARP10Q53GL7 1025 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SETMARQ53H47 684 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 DNTTIP2Q5QJE6 756 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 FNBP1LQ5T0N5 605 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ERMARDQ5T6L9 678 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM171A1Q5VUB5 890 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 CST9LP1Q5W188 147 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 C8orf82Q6P1X6 216 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 WDR93Q6P2C0 686 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ALKBH5Q6P6C2 394 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SYNE3Q6ZMZ3 975 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 Q6ZSV7 163 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ERN2Q76MJ5 926 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 CHST9Q7L1S5 443 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADCK1Q86TW2 530 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 NLRP14Q86W24 1093 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 CEP97Q8IW35 865 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 WDTC1Q8N5D0 677 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC25A41Q8N5S1 370 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TDRD5Q8NAT2 981 aaKnown RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 C11orf65Q8NCR3 313 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADPRHL1Q8NDY3 354 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 CTCFLQ8NI51 663 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SPATA18Q8TC71 538 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 KCNG4Q8TDN1 519 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 NCSTNQ92542 709 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 IP6K1Q92551 441 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 MCRS1Q96EZ8 462 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 CDCA5Q96FF9 252 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 PGAP3Q96FM1 320 aaPredicted RBP2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 MAP7D2Q96T17 732 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 EGFL8Q99944 293 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 FERMT1Q9BQL6 677 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ACAT2Q9BWD1 397 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 C1QTNF1Q9BXJ1 281 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TNMDQ9H2S6 317 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 SFXN1Q9H9B4 322 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 RRP7BPQ9NSQ0 103 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZBTB1Q9Y2K1 713 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 PCDHGB5Q9Y5G0 923 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 RAI2Q9Y5P3 530 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 TEX13CA0A0J9YWL9 993 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 A0A0U1RQK1 487 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 A0A1W2PRG0 241 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TCRBV21S2A2A0A5A6 115 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF320A2RRD8 509 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 LRRD1A4D1F6 860 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM90A20PA6NIJ5 464 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ERI2A8K979 691 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CDRT15L2A8MXV6 281 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 M0QYT0 321 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 PSMD14O00487 310 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CTDSP2O14595 271 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SCAMP1O15126 338 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms