RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SLC36A3Q495N2 470 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 IER5Q5VY09 327 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ATG9BQ674R7 924 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PSAPL1Q6NUJ1 521 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DCLRE1AQ6PJP8 1040 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ERASQ7Z444 233 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PIGWQ7Z7B1 504 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CDKL3Q8IVW4 592 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TTYH2Q9BSA4 534 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TBCDQ9BTW9 1192 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NKX2-4Q9H2Z4 354 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TRIM45Q9H8W5 580 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DMAP1Q9NPF5 467 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 LANCL2Q9NS86 450 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RBM12Q9NTZ6 932 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DNAI1Q9UI46 699 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 METRNQ9UJH8 293 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PKP3Q9Y446 797 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 IGKV6D-41A0A0C4DH26 115 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ANKRD30BLA7E2S9 258 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PRR23D1E9PI22 279 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 K7ERQ8 282 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PRR23D2P0DMB1 279 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 BMP4P12644 408 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SERPINF1P36955 418 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 BTDP43251 543 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF135P52742 658 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CASP9P55211 416 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 GFRA1P56159 465 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NOGQ13253 232 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 LRRC38Q5VT99 294 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 FKBP1CQ5VVH2 108 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SYDE1Q6ZW31 735 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CENPVQ7Z7K6 275 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CELF5Q8N6W0 485 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 XXYLT1Q8NBI6 393 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 FBXL13Q8NEE6 735 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 XAGE5Q8WWM1 108 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF606Q8WXB4 792 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 KISS1RQ969F8 398 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 MCUR1Q96AQ8 359 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 MCRS1Q96EZ8 462 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RBBP8Q99708 897 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 GON7Q9BXV9 100 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RRAGCQ9HB90 399 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PARVBQ9HBI1 364 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 C3orf14Q9HBI5 128 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 USP29Q9HBJ7 922 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 BATF3Q9NR55 127 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 YAE1D1Q9NRH1 226 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 GPR27Q9NS67 375 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TAS2R14Q9NYV8 317 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DLGAP2Q9P1A6 1054 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DLGAP4Q9Y2H0 992 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DHX15O43143 795 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHGA12O60330 932 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ENTPD3O75355 529 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RPS6KA5O75582 802 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SEC14L2O76054 403 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TGFAP01135 160 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 THBS1P07996 1170 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RPS2P15880 293 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NOS3P29474 1203 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CORO1AP31146 461 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PBX3P40426 434 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RTP1P59025 263 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SRP54P61011 504 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RPL7AP62424 266 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DAB2IPQ5VWQ8 1189 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 EEF1DP3Q658K8 133 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM200AQ86VY9 491 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PSTKQ8IV42 348 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DHX40Q8IX18 779 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RYBPQ8N488 228 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 OR13C2Q8NGS9 318 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 NFKBIDQ8NI38 313 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PPP4R1Q8TF05 950 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF384Q8TF68 577 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ABHD5Q8WTS1 349 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ZDHHC1Q8WTX9 485 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 STMN2Q93045 179 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CXorf58Q96LI9 332 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TEFMQ96QE5 360 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CYTH2Q99418 400 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RAD9AQ99638 391 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 APOL2Q9BQE5 337 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC3Q9BQI4 270 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TTPALQ9BTX7 342 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 LRRC3Q9BY71 257 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 C2orf40Q9H1Z8 148 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 AZI2Q9H6S1 392 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 VAT1LQ9HCJ6 419 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 FGFR1OP2Q9NVK5 253 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ASNSD1Q9NWL6 643 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DPP3Q9NY33 737 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 DNAJB9Q9UBS3 223 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHGA9Q9Y5G4 932 aaKnown RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHGA7Q9Y5G6 932 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CNTNAP5Q8WYK1 1306 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms