RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 PRAC2D3DTV9 90 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 PRR23D1E9PI22 279 aaPredicted RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 TIPRLO75663 272 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 MLYCDO95822 493 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 EGFP01133 1207 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 PRR23D2P0DMB1 279 aaPredicted RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 HSPA1AP0DMV8 641 aaKnown RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 HSPA1BP0DMV9 641 aaKnown RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 TNFAIP3P21580 790 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 SLC20A2Q08357 652 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 CSTF3Q12996 717 aaKnown RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 KRT24Q2M2I5 525 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 CDONQ4KMG0 1287 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 ZNF280DQ6N043 979 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 FAM122CQ6P4D5 195 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 TMTC3Q6ZXV5 915 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 ZNF34Q8IZ26 560 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 PCDH20Q8N6Y1 951 aaKnown RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 SORCS1Q8WY21 1168 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 FIG4Q92562 907 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 ORAI1Q96D31 301 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 RRNAD1Q96FB5 475 aaKnown RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 PKP4Q99569 1192 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 PCDH9Q9HC56 1237 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 SMC4Q9NTJ3 1288 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 ACSS1Q9NUB1 689 aaPredicted RBP6.98□□□□□ -1.29
CHD1-205ENST00000508756 MCM9Q9NXL9 1143 aa6.98□□□□□ -1.29
CHD1-205ENST00000508756 IGHV4OR15-8A0A075B7B6 117 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 FAM237BA0A1B0GVD1 139 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 DDNO94850 711 aaPredicted RBP6.97□□□□□ -1.29
CHD1-205ENST00000508756 RRM1P23921 792 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 CLCN3P51790 818 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 MED22Q15528 200 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 FAM76BQ5HYJ3 339 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 FRMD1Q8N878 549 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 HMGCLL1Q8TB92 370 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 RHBDF1Q96CC6 855 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 PCYT2Q99447 389 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 OLA1Q9NTK5 396 aaKnown RBP6.97□□□□□ -1.29
CHD1-205ENST00000508756 ADAM18Q9Y3Q7 739 aa6.97□□□□□ -1.29
CHD1-205ENST00000508756 PDS5AQ29RF7 1337 aaKnown RBP6.97□□□□□ -1.29
CHD1-205ENST00000508756 MAN1A1P33908 653 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 CSNK2A1P68400 391 aaPredicted RBP6.96□□□□□ -1.3
CHD1-205ENST00000508756 ILF3Q12906 894 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD1-205ENST00000508756 KRT32Q14532 448 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 ZNF718Q3SXZ3 478 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 KCNT1Q5JUK3 1230 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 TTI2Q6NXR4 508 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 UNQ6126/PRO20091Q6UXV3 157 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 SFR1Q86XK3 245 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 BEST3Q8N1M1 668 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 CSNK2A3Q8NEV1 391 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 SECTM1Q8WVN6 248 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 CSTL1Q9H114 145 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 EBF2Q9HAK2 575 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 RANGRFQ9HD47 186 aaPredicted RBP6.96□□□□□ -1.3
CHD1-205ENST00000508756 LOXL2Q9Y4K0 774 aa6.96□□□□□ -1.3
CHD1-205ENST00000508756 C1orf226A1L170 272 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 GOLGA6L9A6NEM1 432 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 BUB3O43684 328 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 IPO7O95373 1038 aaKnown RBP6.95□□□□□ -1.3
CHD1-205ENST00000508756 S1PR1P21453 382 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 TMPOP42166 694 aaKnown RBP6.95□□□□□ -1.3
CHD1-205ENST00000508756 RELQ04864 619 aaPredicted RBP6.95□□□□□ -1.3
CHD1-205ENST00000508756 DDX10Q13206 875 aaKnown RBP6.95□□□□□ -1.3
CHD1-205ENST00000508756 HAUS3Q68CZ6 603 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 DSTYKQ6XUX3 929 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 TUBA1AQ71U36 451 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 PXKQ7Z7A4 578 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 MAGEC3Q8TD91 643 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 SLC20A1Q8WUM9 679 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 ARHGEF26Q96DR7 871 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 HARBI1Q96MB7 349 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 MTERF1Q99551 399 aaKnown RBP6.95□□□□□ -1.3
CHD1-205ENST00000508756 NAP1L4Q99733 375 aaKnown RBP6.95□□□□□ -1.3
CHD1-205ENST00000508756 TUBA1CQ9BQE3 449 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 ZNF69Q9UC07 566 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 PCDHAC2Q9Y5I4 1007 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 MAU2Q9Y6X3 613 aa6.95□□□□□ -1.3
CHD1-205ENST00000508756 CCNDBP1O95273 360 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 HLA-DOBP13765 273 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 CORO1AP31146 461 aaKnown RBP6.94□□□□□ -1.3
CHD1-205ENST00000508756 FOXM1Q08050 763 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 GOLGA8DPQ0D2H9 430 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 ZNF672Q499Z4 452 aaPredicted RBP6.94□□□□□ -1.3
CHD1-205ENST00000508756 FAAH2Q6GMR7 532 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 WBP2NLQ6ICG8 309 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 FAM180BQ6P0A1 224 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 GFRALQ6UXV0 394 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 CACNA2D4Q7Z3S7 1137 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 MAATS1Q7Z4T9 603 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 NAGSQ8N159 534 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 SRBD1Q8N5C6 995 aaKnown RBP6.94□□□□□ -1.3
CHD1-205ENST00000508756 TEX19Q8NA77 164 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 POC1AQ8NBT0 407 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 BBS10Q8TAM1 723 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 ABTB1Q969K4 478 aaPredicted RBP6.94□□□□□ -1.3
CHD1-205ENST00000508756 UBTD1Q9HAC8 227 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 KCNG2Q9UJ96 466 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms