RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RAMP2O60895 175 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 SRGAP2O75044 1071 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TULP3O75386 442 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ATP5BP06576 529 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 INHBBP09529 407 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CISD3P0C7P0 127 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PRLRP16471 622 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 FAHP16930 419 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ERCC2P18074 760 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 OPRD1P41143 372 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 NR2C2P49116 596 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 GEMIN4P57678 1058 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TAS2R40P59535 323 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 RPS24P62847 133 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PHC1P78364 1004 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 MRPS21P82921 87 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TMPRSS15P98073 1019 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF33AQ06730 810 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 DPYSQ14117 519 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 DPYSL3Q14195 570 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRRC32Q14392 662 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PAFAH1B3Q15102 231 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 RPS6KA1Q15418 735 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TAZQ16635 292 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 SMTNL2Q2TAL5 461 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PARP15Q460N3 678 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ATP13A4Q4VNC1 1196 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 RAB6CQ53S08 254 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ANKRD20A8PQ5CZ79 823 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PPP6R3Q5H9R7 873 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TMEM196Q5HYL7 178 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 KCNT1Q5JUK3 1230 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 SEL1L2Q5TEA6 688 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CPZQ66K79 652 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 RFWD3Q6PCD5 774 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TMCO3Q6UWJ1 677 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRMT11Q7Z4G4 463 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 BMP8AQ7Z5Y6 402 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 C14orf80Q86SX3 495 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 NLRP14Q86W24 1093 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TERB1Q8NA31 727 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 KYQ8NBH2 561 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAIP1Q8WWC4 291 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CASKIN2Q8WXE0 1202 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 HSPH1Q92598 858 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 IGSF8Q969P0 613 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TTC17Q96AE7 1141 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PBKQ96KB5 322 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PRICKLE1Q96MT3 831 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CSPG4P5Q96PW8 444 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 RNF157Q96PX1 679 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 NAP1L3Q99457 506 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 YIPF4Q9BSR8 244 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CALN1Q9BXU9 219 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 FRMD8P1Q9BZ68 369 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 BRD8Q9H0E9 1235 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 RAB6CQ9H0N0 254 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CARD9Q9H257 536 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 HEBP1Q9NRV9 189 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 DNAJC17Q9NVM6 304 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 HAUS2Q9NVX0 235 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRMT1Q9NXH9 659 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CWC15Q9P013 229 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF212Q9UDV6 495 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRIM10Q9UDY6 481 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 MUTYHQ9UIF7 546 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PYCARDQ9ULZ3 195 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 HPCAL4Q9UM19 191 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TFR2Q9UP52 801 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLC8A2Q9UPR5 921 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRIOO75962 3097 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 KIAA1549LQ6ZVL6 1849 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 VCANP13611 3396 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ATG2BQ96BY7 2078 aa5.59□□□□□ -1.52
HMGB1P44-201ENST00000508597 KANSL1LA0AUZ9 987 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TBC1D3BA6NDS4 549 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ARHGAP42A6NI28 874 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 C3orf70A6NLC5 250 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FAM72CH0Y354 149 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 APOC4-APOC2K7ER74 178 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 DVL2O14641 736 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 APOL1O14791 398 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 DCLK1O15075 740 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ATG13O75143 517 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CNTN5O94779 1100 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TJP3O95049 919 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 KAT7O95251 611 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FTCDO95954 541 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 APOC2P02655 101 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 RHOCP08134 193 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 SRPRAP08240 638 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 HNRNPLP14866 589 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TCF4P15884 667 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 GOT1P17174 413 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TCP1P17987 556 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 POLR2EP19388 210 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TGM2P21980 687 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL4RP24394 825 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 HLA-FP30511 346 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms