RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLC25A12O75746 678 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PIGNO95427 931 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FTLP02792 175 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PAEPP09466 180 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 GSTM1P09488 218 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FBXO45P0C2W1 286 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CD46P15529 392 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MPSTP25325 297 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TARSP26639 723 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SLC6A11P48066 632 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 GEMP55040 296 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MC1RQ01726 317 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SLC6A3Q01959 620 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ILF3Q12906 894 aaKnown RBP eCLIP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SRSF5Q13243 272 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CST6Q15828 149 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SLC5A9Q2M3M2 681 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HSF5Q4G112 596 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CDCA2Q69YH5 1023 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TAS1R3Q7RTX0 852 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RHOT1Q8IXI2 618 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DEFB106AQ8N104 65 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 KIF2BQ8N4N8 673 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF366Q8N895 744 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LNX1Q8TBB1 728 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DENND1AQ8TEH3 1009 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 WNT8BQ93098 351 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MYO19Q96H55 970 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CEP295NLQ96MC4 621 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 NDC1Q9BTX1 674 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CPEB1Q9BZB8 566 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PLA2G2FQ9BZM2 168 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FAM96AQ9H5X1 160 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CAPN11Q9UMQ6 739 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ERVK-11Q9UQG0 969 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MTMR6Q9Y217 621 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 KLK10O43240 276 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RBP3P10745 1247 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CDK4P11802 303 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PAX7P23759 505 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 EIF3EP60228 445 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 VSNL1P62760 191 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ZBED6P86452 979 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RGS1Q08116 209 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FAPQ12884 760 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LINC00523Q86TU6 105 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RAVER1Q8IY67 606 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 BEND7Q8N7W2 519 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ANKRD52Q8NB46 1076 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RLN3Q8WXF3 142 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HAS1Q92839 578 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LENG9Q96B70 501 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RNF31Q96EP0 1072 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ZDHHC12Q96GR4 267 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MOGAT1Q96PD6 335 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DPYSL5Q9BPU6 564 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PAAF1Q9BRP4 392 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 THTPAQ9BU02 230 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PHACTR1Q9C0D0 580 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC90BQ9GZT6 254 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SMOC1Q9H4F8 434 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CARS2Q9HA77 564 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 BPIFA1Q9NP55 256 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ADAMTS1Q9UHI8 967 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TTC7AQ9ULT0 858 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TMED5Q9Y3A6 229 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 OR10H1Q9Y4A9 318 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 NOX1Q9Y5S8 564 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DNMT3AQ9Y6K1 912 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RNF103-CHMP3A0A140T963 221 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TTC34A8MYJ7 566 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 C5orf67F2Z3F1 127 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 H3BNH8 94 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CASKO14936 926 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ATP8B1O43520 1251 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 POP4O95707 220 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PLGP00747 810 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 HEXBP07686 556 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SERPINF2P08697 491 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CDH2P19022 906 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 IL2P60568 153 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GTF2BQ00403 316 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GUCY2DQ02846 1103 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 BTKQ06187 659 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CBLBQ13191 982 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DLG2Q15700 870 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SMAD1Q15797 465 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ECM1Q16610 540 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GFOD2Q3B7J2 385 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 STXBP5Q5T5C0 1151 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 STPG1Q5TH74 334 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 KIAA1161Q6NSJ0 714 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 KIAA0907Q7Z7F0 614 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC47A2Q86VL8 602 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 WDR5BQ86VZ2 330 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DENND6AQ8IWF6 608 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LIX1Q8N485 282 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DPP10Q8N608 796 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms