RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ZNF215Q9UL58 517 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 TMEM5Q9Y2B1 443 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 PCDHGB5Q9Y5G0 923 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 C17orf113A0A1B0GUU1 675 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 A0A1W2PRQ8 180 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 SH2D7A6NKC9 451 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 PTGES3LE9PB15 166 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 EBAG9O00559 213 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 TIMM23O14925 209 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 CEP104O60308 925 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 F9P00740 461 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 PTMSP20962 102 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 CDKN1AP38936 164 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 BLKP51451 505 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF132P52740 706 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 ECT2LQ008S8 904 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 NEXNQ0ZGT2 675 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 ARHGEF6Q15052 776 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 ACCSLQ4AC99 568 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 ARMC3Q5W041 872 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 PLA2G4FQ68DD2 849 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 NAPEPLDQ6IQ20 393 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 LSMEM1Q8N8F7 131 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 SAAL1Q96ER3 474 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 MPHOSPH8Q99549 860 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 FUZQ9BT04 418 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 SMARCAD1Q9H4L7 1026 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 MROH8Q9H579 483 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF696Q9H7X3 374 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 PPP1R14DQ9NXH3 145 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 NDRG3Q9UGV2 375 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 RPS6KA6Q9UK32 745 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 NAALADL1Q9UQQ1 740 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 TCF19Q9Y242 345 aa4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 TP53BP1Q12888 1972 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-209ENST00000508304 hCG_1807616A0A1W2PRN6 198 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 P4HA2O15460 535 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 PTP4A3O75365 173 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GAGE7O76087 117 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 APOA4P06727 396 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GAGE12FP0CL80 117 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GAGE12GP0CL81 117 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GAGE12IP0CL82 117 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 SLC2A4P14672 509 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 PTPN2P17706 415 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 PSMA4P25789 261 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 TTKP33981 857 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 PPARGP37231 505 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 CTCFP49711 727 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 RPS3AP61247 264 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 MC1RQ01726 317 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GOLGA8DPQ0D2H9 430 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GAGE1Q13065 139 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 GAGE4Q13068 117 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 ITGADQ13349 1161 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 PRPF4BQ13523 1007 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 FAM69BQ5VUD6 431 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 IKBIPQ70UQ0 350 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 RRM2BQ7LG56 351 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 SHFQ7M4L6 423 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 CNTROBQ8N137 903 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 ADSSL1Q8N142 457 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 C17orf53Q8N3J3 647 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 TTC39CQ8N584 583 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 TNIP2Q8NFZ5 429 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 METTL6Q8TCB7 284 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 RUFY2Q8WXA3 655 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 RAB40AQ8WXH6 277 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 JAKMIP2Q96AA8 810 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZC3HAV1LQ96H79 300 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 EPHX3Q9H6B9 360 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZFP57Q9NU63 452 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 PSAT1Q9Y617 370 aa4.24□□□□□ -1.73
TRAPPC13-209ENST00000508304 HNRNPCL2B2RXH8 293 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 FAM72CH0Y354 149 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 PER2O15055 1255 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SLC22A3O75751 556 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 NDUFB4O95168 129 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 BAG4O95429 457 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 CLEC3BP05452 202 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 CD58P19256 250 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SSTR2P30874 369 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 HOXD13P35453 343 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 TIMP3P35625 211 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 ARL1P40616 181 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 LRMPQ12912 555 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 FAM72AQ5TYM5 149 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SNX30Q5VWJ9 437 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 FAM72DQ6L9T8 149 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 KRT77Q7Z794 578 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 ANKRD23Q86SG2 305 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 TBC1D26Q86UD7 250 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 FAM72BQ86X60 149 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SRBD1Q8N5C6 995 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF441Q8N8Z8 693 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 KBTBD3Q8NAB2 608 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 USP6NLQ92738 828 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SMARCE1Q969G3 411 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 ATP6V1E2Q96A05 226 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SLF1Q9BQI6 1058 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms