RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 KLHDC7BQ96G42 594 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 SMIM14Q96QK8 99 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 SPATA16Q9BXB7 569 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 ABCG8Q9H221 673 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 PHPT1Q9NRX4 125 aaPredicted RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 PIH1D1Q9NWS0 290 aaKnown RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 PILRBQ9UKJ0 227 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 SOX13Q9UN79 622 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 MAD1L1Q9Y6D9 718 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 GLYATL1P3A0A0U1RQE8 302 aa20■□□□□ 0.79
USP53-203ENST00000507597 MROH6A6NGR9 719 aa20■□□□□ 0.79
USP53-203ENST00000507597 CACNB4O00305 520 aaPredicted RBP20■□□□□ 0.79
USP53-203ENST00000507597 AURKAO14965 403 aa20■□□□□ 0.79
USP53-203ENST00000507597 PCCBP05166 539 aa20■□□□□ 0.79
USP53-203ENST00000507597 POLBP06746 335 aa20■□□□□ 0.79
USP53-203ENST00000507597 BPIP17213 487 aa20■□□□□ 0.79
USP53-203ENST00000507597 MAOBP27338 520 aa20■□□□□ 0.79
USP53-203ENST00000507597 PRAMEP78395 509 aa20■□□□□ 0.79
USP53-203ENST00000507597 FGL2Q14314 439 aa20■□□□□ 0.79
USP53-203ENST00000507597 HLTFQ14527 1009 aaKnown RBP eCLIP20■□□□□ 0.79
USP53-203ENST00000507597 IRF4Q15306 451 aa20■□□□□ 0.79
USP53-203ENST00000507597 BBS9Q3SYG4 887 aa20■□□□□ 0.79
USP53-203ENST00000507597 TSTD2Q5T7W7 516 aa20■□□□□ 0.79
USP53-203ENST00000507597 ZNF534Q76KX8 674 aa20■□□□□ 0.79
USP53-203ENST00000507597 TMEM145Q8NBT3 493 aa20■□□□□ 0.79
USP53-203ENST00000507597 UBXN4Q92575 508 aa20■□□□□ 0.79
USP53-203ENST00000507597 KIFC1Q9BW19 673 aa20■□□□□ 0.79
USP53-203ENST00000507597 TM9SF3Q9HD45 589 aa20■□□□□ 0.79
USP53-203ENST00000507597 BPIFA1Q9NP55 256 aa20■□□□□ 0.79
USP53-203ENST00000507597 RAPGEFL1Q9UHV5 662 aa20■□□□□ 0.79
USP53-203ENST00000507597 FAM237BA0A1B0GVD1 139 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 H7C0S8 307 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 PFDN6O15212 129 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 FOXD2O60548 495 aaPredicted RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 SYPP08247 313 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 HOXC4P09017 264 aaPredicted RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 RHOXF2BP0C7M4 288 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 ITGALP20701 1170 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 MCM3P25205 808 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 MAGEA3P43357 314 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 ZNF140P52738 457 aaPredicted RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 THOP1P52888 689 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 LPAL2Q16609 132 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 HENMT1Q5T8I9 393 aaKnown RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 PEAR1Q5VY43 1037 aaPredicted RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 ABI3BPQ7Z7G0 1075 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 IFT81Q8WYA0 676 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 ULK4Q96C45 1275 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 STAMBPL1Q96FJ0 436 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 KLF6Q99612 283 aaPredicted RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 MYOCQ99972 504 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 RHOXF2Q9BQY4 288 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 RIOK2Q9BVS4 552 aaKnown RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 NUSAP1Q9BXS6 441 aaKnown RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 ZDHHC5Q9C0B5 715 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 WDR26Q9H7D7 661 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 SYBUQ9NX95 663 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 GRHL1Q9NZI5 618 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 NCDNQ9UBB6 729 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 DMGDHQ9UI17 866 aaKnown RBP19.99■□□□□ 0.79
USP53-203ENST00000507597 CD84Q9UIB8 345 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 EML5Q05BV3 1969 aa19.99■□□□□ 0.79
USP53-203ENST00000507597 TRPM6Q9BX84 2022 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 THADAQ6YHU6 1953 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 GOLGA8CPA6NN73 597 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 VILLO15195 856 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 LRP3O75074 770 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 AVILO75366 819 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 TRIM23P36406 574 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 CBLBQ13191 982 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 INPP5AQ14642 412 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 GPR33Q49SQ1 333 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 CCDC38Q502W7 563 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 IL27RAQ6UWB1 636 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 ADAMTSL4Q6UY14 1074 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 PTAR1Q7Z6K3 402 aaPredicted RBP19.98■□□□□ 0.79
USP53-203ENST00000507597 OXR1Q8N573 874 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 EIF1ADQ8N9N8 165 aaKnown RBP19.98■□□□□ 0.79
USP53-203ENST00000507597 GPR26Q8NDV2 337 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 ZNF398Q8TD17 642 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 HEXDCQ8WVB3 486 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 EID2BQ96D98 161 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 CDKN2AIPNLQ96HQ2 116 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 SLC6A18Q96N87 628 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 APOOQ9BUR5 198 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 EBF2Q9HAK2 575 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 FZD3Q9NPG1 666 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 CHRAC1Q9NRG0 131 aa19.98■□□□□ 0.79
USP53-203ENST00000507597 A0A0U1RQS6 177 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 PROB1E7EW31 1015 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 TLR4O00206 839 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 BUD23O43709 281 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 USP1O94782 785 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 TUBBP07437 444 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 THEGLP0DJG4 465 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 GM2AP17900 193 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 PGAM1P18669 254 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 PSMA3P25788 255 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 MPLP40238 635 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 TMPRSS15P98073 1019 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms