RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ERCC2P18074 760 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 GKP32189 559 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ABL2P42684 1182 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 PAPOLAP51003 745 aaKnown RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 RPS6KA3P51812 740 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CLDN2P57739 230 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 HNRNPKP61978 463 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 POLR2LP62875 67 aaKnown RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 PPP2R2AP63151 447 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 E2F1Q01094 437 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ELP6Q0PNE2 266 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 BLMHQ13867 455 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 PTK2BQ14289 1009 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 FGL2Q14314 439 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 DPYSL2Q16555 572 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CA9Q16790 459 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 UGP2Q16851 508 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 TMEM52BQ4KMG9 183 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ATXN7L2Q5T6C5 722 aaPredicted RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 BRAT1Q6PJG6 821 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CYP4V2Q6ZWL3 525 aaPredicted RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 HOOK3Q86VS8 718 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 PROSER1Q86XN7 944 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 LMNTD2Q8IXW0 634 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 SLC22A18ASQ8N1D0 253 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 NIPA2Q8N8Q9 360 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 FAM181AQ8N9Y4 354 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CCDC63Q8NA47 563 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 OR13H1Q8NG92 308 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 OR6K2Q8NGY2 324 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 OR4C6Q8NH72 309 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 TEKT4Q8WW24 435 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ZCCHC14Q8WYQ9 949 aaKnown RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 RFFLQ8WZ73 363 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CCT6BQ92526 530 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ZNF653Q96CK0 615 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 SEC16BQ96JE7 1060 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ZNF599Q96NL3 588 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ZIM3Q96PE6 472 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 PEBP4Q96S96 227 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 SNRNP25Q9BV90 132 aaKnown RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 DUSP23Q9BVJ7 150 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 C1QTNF7Q9BXJ2 289 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CALN1Q9BXU9 219 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 FAM129AQ9BZQ8 928 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 TRIM7Q9C029 511 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CCDC86Q9H6F5 360 aaKnown RBP8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ZWILCHQ9H900 591 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 USP29Q9HBJ7 922 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 TMBIM4Q9HC24 238 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 NOD2Q9HC29 1040 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 LHX3Q9UBR4 397 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CA5BQ9Y2D0 317 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 CSNK1G3Q9Y6M4 447 aa8.07□□□□□ -1.12
SCN1A-207ENST00000507401 ANKRD11Q6UB99 2663 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 SPEGQ15772 3267 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 A0A087X0T9 212 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 A0A1W2PQ67 120 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TRABD2BA6NFA1 517 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TMEM110-MUSTN1A8MSY1 372 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TAF4O00268 1085 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TRIM38O00635 465 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TPP1O14773 563 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 RAD51BO15315 384 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 SIGLEC6O43699 453 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PALMO75781 387 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TM7SF2O76062 418 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CYP1A2P05177 515 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 FAM228BP0C875 321 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 GIMD1P0DJR0 217 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ALPPL2P10696 532 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CKMT1AP12532 417 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 NME1P15531 152 aaKnown RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 XPAP23025 273 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 HNF1BP35680 557 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ARL4AP40617 200 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 MAGEA8P43361 318 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ACADVLP49748 655 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PEX5P50542 639 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 RENBPP51606 427 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PFN3P60673 137 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ELF3P78545 371 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 POU4F2Q12837 409 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 DNAJC3Q13217 504 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 DPYSQ14117 519 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 FZD2Q14332 565 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ZRSR2Q15696 482 aaKnown RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PPP6R3Q5H9R7 873 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ALKBH5Q6P6C2 394 aaKnown RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 DHRS13Q6UX07 377 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 BZW1Q7L1Q6 419 aaKnown RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 POLNQ7Z5Q5 900 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CPLX4Q7Z7G2 160 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PARGQ86W56 976 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 LRRC49Q8IUZ0 686 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ARHGAP12Q8IWW6 846 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CXorf40AQ8TE69 158 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CPLX3Q8WVH0 158 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms