RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TKTL2Q9H0I9 626 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 THAP9Q9H5L6 903 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 WDCPQ9H6R7 721 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 PHPT1Q9NRX4 125 aaPredicted RBP7.17□□□□□ -1.26
VCAN-207ENST00000507162 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 SH3BGRL2Q9UJC5 107 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 HPCAL4Q9UM19 191 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 SNX7Q9UNH6 387 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.17□□□□□ -1.26
VCAN-207ENST00000507162 LRP4O75096 1905 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 SEC16AO15027 2179 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 GOLGA6CA6NDK9 693 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 GOLGA6BA6NDN3 693 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 E5RJQ4 531 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 RNF225M0QZC1 329 aaPredicted RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 PDXKO00764 312 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 INSIG1O15503 277 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 CALUO43852 315 aaPredicted RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 RHOBTB3O94955 611 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 TIAF1O95411 115 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 PAEPP09466 180 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 GOLGA6DP0CG33 693 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 FGF5P12034 268 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 MYCLP1P12525 358 aaPredicted RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 TYRP1P17643 537 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 FASLGP48023 281 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 MXI1P50539 228 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 VAV2P52735 878 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 IST1P53990 364 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 CDC16Q13042 620 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 STK4Q13043 487 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 MTA1Q13330 715 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ATP1A4Q13733 1029 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ACOX1Q15067 660 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 AGERQ15109 404 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.16□□□□□ -1.26
VCAN-207ENST00000507162 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 CFAP58Q5T655 872 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 PWWP2BQ6NUJ5 590 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 XKRXQ6PP77 449 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ZNF783Q6ZMS7 281 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 Q6ZS92 163 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ZNF765Q7L2R6 523 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 BRAPQ7Z569 592 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 PHLDB2Q86SQ0 1253 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ZNF354CQ86Y25 554 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ZNF683Q8IZ20 524 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 SFRP1Q8N474 314 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 PAF1Q8N7H5 531 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 DNAJB14Q8TBM8 379 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ADAMTS17Q8TE56 1095 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 NUDT8Q8WV74 236 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 TM9SF4Q92544 642 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ARHGEF2Q92974 986 aaKnown RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 VOPP1Q96AW1 172 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 SH3KBP1Q96B97 665 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 MTFMTQ96DP5 389 aaKnown RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 GDAP1L1Q96MZ0 367 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 TTYH3Q9C0H2 523 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 STN1Q9H668 368 aaKnown RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 CBX8Q9HC52 389 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 ZBTB20Q9HC78 741 aaPredicted RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 PDE7BQ9NP56 450 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 GOLGA6AQ9NYA3 693 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 RARRES3Q9UL19 164 aa7.16□□□□□ -1.26
VCAN-207ENST00000507162 RPH3AQ9Y2J0 694 aaPredicted RBP7.16□□□□□ -1.26
VCAN-207ENST00000507162 PVALEFA0A1B0GWK0 134 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 GOLGA6L3A6NEY3 463 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 FANCGO15287 622 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 BUB1O43683 1085 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 KIF1CO43896 1103 aaKnown RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 EML2O95834 649 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 IGSF6O95976 241 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 ANKRD34CP0C6C1 535 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 FOSL1P15407 271 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 AMD1P17707 334 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 GTF2H1P32780 548 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 PSMC2P35998 433 aaKnown RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 PBX1P40424 430 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 GPD2P43304 727 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 SUOXP51687 545 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 GEMIN4P57678 1058 aaKnown RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 RHOAP61586 193 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 LAMB3Q13751 1172 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 STILQ15468 1287 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 HIF1AQ16665 826 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 DCAF10Q5QP82 559 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 CACHD1Q5VU97 1274 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 DENND2CQ68D51 928 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 DENND1BQ6P3S1 775 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 MTFR2Q6P444 385 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 FAM180AQ6UWF9 173 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 TMEM207Q6UWW9 146 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 IGFL3Q6UXB1 125 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 RPTNQ6XPR3 784 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 MEX3BQ6ZN04 569 aaKnown RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 MARK2Q7KZI7 788 aaKnown RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 SLC9B2Q86UD5 537 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 CBARPQ8N350 705 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms