RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 BZW1Q7L1Q6 419 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 ZNF438Q7Z4V0 828 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 CCHCR1Q8TD31 782 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 ZDHHC1Q8WTX9 485 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 CRELD1Q96HD1 420 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 CCDC42Q96M95 316 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 OR2M4Q96R27 311 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 SRPK1Q96SB4 655 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 MAK16Q9BXY0 300 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 RMI1Q9H9A7 625 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 RAD18Q9NS91 495 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 GOLGA6AQ9NYA3 693 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 INTUQ9ULD6 942 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 SHROOM3Q8TF72 1996 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 FASNP49327 2511 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 PPP1R12AO14974 1030 aaPredicted RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 NVLO15381 856 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 KDELR1P24390 212 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 UGT1A5P35504 534 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 GJC1P36383 396 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 GNPDA1P46926 289 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 STC1P52823 247 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 PPIDQ08752 370 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 TRA2AQ13595 282 aaKnown RBP eCLIP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 PDK1Q15118 436 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC14A2Q15849 920 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 ASTE1Q2TB18 679 aaPredicted RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 TMEM164Q5U3C3 297 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 FOXR1Q6PIV2 292 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 PIM3Q86V86 326 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 CNGA4Q8IV77 575 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 AVL9Q8NBF6 648 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 NAF1Q96HR8 494 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 BBC3Q96PG8 261 aaPredicted RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 ABCG8Q9H221 673 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 PCDH9Q9HC56 1237 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 PKD2L2Q9NZM6 624 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 SEPT10Q9P0V9 454 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 TAAR2Q9P1P5 351 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 VPS18Q9P253 973 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 RABGEF1Q9UJ41 708 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 SUFUQ9UMX1 484 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 TTLL3Q9Y4R7 772 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 RNF215Q9Y6U7 377 aa14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 COL27A1Q8IZC6 1860 aaPredicted RBP14.37□□□□□ -0.11
HMGCS1-203ENST00000507004 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 HGSO14964 777 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 MTA2O94776 668 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 PDHA1P08559 390 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC2A4P14672 509 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 CTPS1P17812 591 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 ADCY8P40145 1251 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 IFI35P80217 286 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 DSC2Q02487 901 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 PTSQ03393 145 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 SQSTM1Q13501 440 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 TCEA2Q15560 299 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 MAP9Q49MG5 647 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 XKR5Q6UX68 686 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 TSPAN33Q86UF1 283 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 GALNT13Q8IUC8 556 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 PQLC3Q8N755 202 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 Q8N9G6 341 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 ARRDC2Q8TBH0 407 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 MLPHQ9BV36 600 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 ABHD10Q9NUJ1 306 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 DDX56Q9NY93 547 aaKnown RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 ATXN7L1Q9ULK2 861 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 ARHGEF17Q96PE2 2063 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-203ENST00000507004 LRRD1A4D1F6 860 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 ANKRD66B4E2M5 251 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 GPR89AB7ZAQ6 455 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 K7ENP7 123 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 APOL1O14791 398 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 FGF1P05230 155 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 HLA-DQB2P05538 268 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 GPR89BP0CG08 455 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 LIPCP11150 499 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 ACTR1BP42025 376 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 TAS2R40P59535 323 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 ACTR1AP61163 376 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 GPLD1P80108 840 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 B4GALNT1Q00973 533 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 CTBSQ01459 385 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 GBE1Q04446 702 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 MESDQ14696 234 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 TCEAL1Q15170 157 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 KCTD16Q68DU8 428 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC9A4Q6AI14 798 aa14.35□□□□□ -0.11
HMGCS1-203ENST00000507004 INO80CQ6PI98 192 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms