RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 TSEN2Q8NCE0 465 aaKnown RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 SLC20A1Q8WUM9 679 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 STARD8Q92502 1023 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 CENPIQ92674 756 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 NTAN1Q96AB6 310 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 RTP4Q96DX8 246 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 NUS1Q96E22 293 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 RNF31Q96EP0 1072 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 CELF6Q96J87 481 aaKnown RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 ATP13A3Q9H7F0 1226 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PDFQ9HBH1 243 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PHPT1Q9NRX4 125 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PLEKHB1Q9UF11 243 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 SUFUQ9UMX1 484 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PLEKHM1Q9Y4G2 1056 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 MRPS18BQ9Y676 258 aaKnown RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 USP9YO00507 2555 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 GOLGA6CA6NDK9 693 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 GOLGA6DP0CG33 693 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 TCN2P20062 427 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 MAP4P27816 1152 aaKnown RBP9.17□□□□□ -0.94
PTPN20-216ENST00000506080 ACTR1BP42025 376 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 CD97P48960 835 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 POLD2P49005 469 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 ACTR1AP61163 376 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 BCL2L1Q07817 233 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 SEPT6Q14141 434 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 TPD52L1Q16890 204 aaPredicted RBP9.17□□□□□ -0.94
PTPN20-216ENST00000506080 HSP90AA4PQ58FG1 418 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 KLHDC7AQ5VTJ3 777 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 AFMIDQ63HM1 303 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 DOK6Q6PKX4 331 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 UMODL1-AS1Q8N2C9 162 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 BMPERQ8N8U9 685 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 TEX19Q8NA77 164 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 ECHDC3Q96DC8 303 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 AHCYL2Q96HN2 611 aaKnown RBP9.17□□□□□ -0.94
PTPN20-216ENST00000506080 COQ10AQ96MF6 247 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 EFHD1Q9BUP0 239 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 FRMD8Q9BZ67 464 aaPredicted RBP9.17□□□□□ -0.94
PTPN20-216ENST00000506080 SPRY4Q9C004 299 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 NDST4Q9H3R1 872 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 CATSPERBQ9H7T0 1116 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 APMAPQ9HDC9 416 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 TRNAU1APQ9NX07 287 aaKnown RBP9.17□□□□□ -0.94
PTPN20-216ENST00000506080 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 B4GALT6Q9UBX8 382 aa9.17□□□□□ -0.94
PTPN20-216ENST00000506080 UTP20O75691 2785 aaKnown RBP9.17□□□□□ -0.94
PTPN20-216ENST00000506080 SPENQ96T58 3664 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 SPTAN1Q13813 2472 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 WASH4PA8MWX3 477 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 PES1O00541 588 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 CCP110O43303 1012 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 PRAMEF11O60813 436 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 PALMO75781 387 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 STK17BO94768 372 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 AGFG2O95081 481 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 CYP1A1P04798 512 aaPredicted RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 KRT3P12035 628 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 GPD1P21695 349 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 MMP8P22894 467 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 ADCY8P40145 1251 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 CSNK1DP48730 415 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 PAPOLAP51003 745 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 SCNN1BP51168 640 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 MC2RQ01718 297 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 MC1RQ01726 317 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 ABHD18Q0P651 414 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 SQSTM1Q13501 440 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 VWA3BQ502W6 1294 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 RAET1GQ6H3X3 334 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 WDR59Q6PJI9 974 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 CEACAM20Q6UY09 585 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 NSMCE3Q96MG7 304 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 TEFMQ96QE5 360 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 SLC38A3Q99624 504 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 DPYSL5Q9BPU6 564 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 CINPQ9BW66 212 aaPredicted RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 NAA15Q9BXJ9 866 aaKnown RBP9.16□□□□□ -0.94
PTPN20-216ENST00000506080 SLC39A8Q9C0K1 460 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 LRRC19Q9H756 370 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 KLHL3Q9UH77 587 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 FZD10Q9ULW2 581 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 NOTCH2Q04721 2471 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 ICE1Q9Y2F5 2266 aa9.16□□□□□ -0.94
PTPN20-216ENST00000506080 F8VZ95 297 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 TRAFD1O14545 582 aaPredicted RBP9.15□□□□□ -0.94
PTPN20-216ENST00000506080 VPS4BO75351 444 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 GFPT2O94808 682 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 UCHL3P15374 230 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 CHRNB2P17787 502 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 GNLYP22749 145 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 F8A1P23610 371 aa9.15□□□□□ -0.94
PTPN20-216ENST00000506080 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms