RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 MAATS1Q7Z4T9 603 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 TBC1D1Q86TI0 1168 aaPredicted RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 BEST3Q8N1M1 668 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 PCDH20Q8N6Y1 951 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 FRMD1Q8N878 549 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 ANKRD52Q8NB46 1076 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 SMARCE1Q969G3 411 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 FAM149B1Q96BN6 582 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 RRNAD1Q96FB5 475 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 TMEM19Q96HH6 336 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 IGSF21Q96ID5 467 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 METTL2AQ96IZ6 378 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 IL17FQ96PD4 163 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 MAP7D2Q96T17 732 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 ACOX2Q99424 681 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 CMKLR1Q99788 373 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 ITPAQ9BY32 194 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 PLSCR4Q9NRQ2 329 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 ACSS1Q9NUB1 689 aaPredicted RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 DLGAP2Q9P1A6 1054 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 TTC7AQ9ULT0 858 aaPredicted RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 PDS5AQ29RF7 1337 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 SCN5AQ14524 2016 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 A0A0G2JPF8 293 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 A0A1W2PRG0 241 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 HNRNPCL2B2RXH8 293 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 HNRNPCL3B7ZW38 293 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 PRAC2D3DTV9 90 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 SLC16A5O15375 505 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 USO1O60763 962 aaKnown RBP3.85□□□□□ -1.79
CHD1-203ENST00000505657 HNRNPCL1O60812 293 aaKnown RBP3.85□□□□□ -1.79
CHD1-203ENST00000505657 SNRNP70P08621 437 aaKnown RBP3.85□□□□□ -1.79
CHD1-203ENST00000505657 HNRNPCL4P0DMR1 293 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 HLA-DOBP13765 273 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 RAD23BP54727 409 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 NLRP5P59047 1200 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 FAM76BQ5HYJ3 339 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 SRBD1Q8N5C6 995 aaKnown RBP3.85□□□□□ -1.79
CHD1-203ENST00000505657 TEX19Q8NA77 164 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 SLC20A1Q8WUM9 679 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 SORCS1Q8WY21 1168 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 ORAI1Q96D31 301 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 ZNF385AQ96PM9 386 aaKnown RBP3.85□□□□□ -1.79
CHD1-203ENST00000505657 SH3GL2Q99962 352 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 PCGF1Q9BSM1 259 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 RETREG1Q9H6L5 497 aa3.85□□□□□ -1.79
CHD1-203ENST00000505657 RANGRFQ9HD47 186 aaPredicted RBP3.85□□□□□ -1.79
CHD1-203ENST00000505657 MAGEA13PA6NCF6 341 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 PRSS44E7EML9 344 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 CLGNO14967 610 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 HSPA1AP0DMV8 641 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 HSPA1BP0DMV9 641 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 ITGA2P17301 1181 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 DDX5P17844 614 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 S1PR1P21453 382 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 CLCNKAP51800 687 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 GAS1P54826 345 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 DCAF7P61962 342 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 RPL36AP83881 106 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 ECT2LQ008S8 904 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 RELQ04864 619 aaPredicted RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 KCNT1Q5JUK3 1230 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 CCDC30Q5VVM6 783 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 FAAH2Q6GMR7 532 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 GFRALQ6UXV0 394 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 CLEC17AQ6ZS10 378 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 C1orf122Q6ZSJ8 110 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 ZNF771Q7L3S4 317 aaPredicted RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 RSRC2Q7L4I2 434 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 NRROSQ86YC3 692 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 ACVR1CQ8NER5 493 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 NEK9Q8TD19 979 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 FIG4Q92562 907 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 ZKSCAN4Q969J2 545 aaPredicted RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 NAP1L4Q99733 375 aaKnown RBP3.84□□□□□ -1.79
CHD1-203ENST00000505657 PDZD7Q9H5P4 517 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 EBF2Q9HAK2 575 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 LTB4R2Q9NPC1 389 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 MCM9Q9NXL9 1143 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 WWOXQ9NZC7 414 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 CLIC4Q9Y696 253 aa3.84□□□□□ -1.79
CHD1-203ENST00000505657 IGHV4OR15-8A0A075B7B6 117 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 A0A087X0M5 115 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 A0A1B0GX30 115 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 PGPEP1LA6NFU8 196 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 LIPT2A6NK58 231 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 AKR1B15C9JRZ8 316 aaPredicted RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 KCNK5O95279 499 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 EIF2S1P05198 315 aaKnown RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 MYOD1P15172 320 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 CD53P19397 219 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 NFKBIAP25963 317 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 TAS2R38P59533 333 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
CHD1-203ENST00000505657 KRT24Q2M2I5 525 aa3.83□□□□□ -1.8
CHD1-203ENST00000505657 LRIF1Q5T3J3 769 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms