RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 PCDHGA12O60330 932 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 IFNB1P01574 187 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 FGF1P05230 155 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 HLA-DPA1P20036 260 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CSRP1P21291 193 aaKnown RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CD68P34810 354 aaPredicted RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 IGFALSP35858 605 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 ETV3P41162 512 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 GRK6P43250 576 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 RXRGP48443 463 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 NOVA1P51513 510 aaKnown RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 PFN3P60673 137 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 GNG11P61952 73 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 SNX1Q13596 522 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CCNG2Q16589 344 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 PARP6Q2NL67 630 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 FAXCQ5TGI0 409 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 RAET1GQ6H3X3 334 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 C4orf22Q6V702 233 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 MACC1Q6ZN28 852 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 NRSN1Q8IZ57 195 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 SLC35F6Q8N357 371 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CCDC110Q8TBZ0 833 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 RHBDD1Q8TEB9 315 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 C1orf54Q8WWF1 131 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 ATG4AQ8WYN0 398 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 DTD2Q96FN9 168 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 COQ10AQ96MF6 247 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CNTNAP3BQ96NU0 1288 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 LYSMD1Q96S90 227 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CDC6Q99741 560 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 APOOQ9BUR5 198 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CNTNAP3Q9BZ76 1288 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 CDH19Q9H159 772 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 TRABDQ9H4I3 376 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 MAGEE1Q9HCI5 957 aa10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 MBNL1Q9NR56 388 aaKnown RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 PHPT1Q9NRX4 125 aaPredicted RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 R3HDM2Q9Y2K5 976 aaKnown RBP10.52□□□□□ -0.73
AC012339.1-201ENST00000505564 NUMA1Q14980 2115 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 TCRBV7S2A1N4TA0A589 114 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PGRMC1O00264 195 aaKnown RBP10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 GCATO75600 419 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 CLDN7O95471 211 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PRLP01236 227 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 SLC4A1P02730 911 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 CEACAM1P13688 526 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 CTSEP14091 401 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 LHCGRP22888 699 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PSMB4P28070 264 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 GPR1P46091 355 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 STC1P52823 247 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 IL9RQ01113 521 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PPARDQ03181 441 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PTSQ03393 145 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 NFATC4Q14934 902 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 SLC1A5Q15758 541 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PRAMEF14Q5SWL7 426 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 ESRP1Q6NXG1 681 aaKnown RBP10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PNCKQ6P2M8 343 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 ENPP7Q6UWV6 458 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 Q6ZVL8 140 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 ZNF765Q7L2R6 523 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 HSD11B1LQ7Z5J1 315 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 LINC00523Q86TU6 105 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 TSPAN33Q86UF1 283 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 SLC25A41Q8N5S1 370 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 SLC35B2Q8TB61 432 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 TADA1Q96BN2 335 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 AP2M1Q96CW1 435 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 FICDQ9BVA6 458 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 FAM83DQ9H4H8 585 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 USP29Q9HBJ7 922 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 SPASTQ9UBP0 616 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 KLQ9UEF7 1012 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 MOSPD1Q9UJG1 213 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 DOLKQ9UPQ8 538 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 PKP3Q9Y446 797 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 OR1A2Q9Y585 309 aa10.51□□□□□ -0.73
AC012339.1-201ENST00000505564 LOC285095A0A1B0GVY8 99 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 CTAGE9A4FU28 777 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 C2orf81A6NN90 581 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 SH3BP5O60239 455 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 TNFP01375 233 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 CSF2P04141 144 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 HOXC4P09017 264 aaPredicted RBP10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 PIRTP0C851 137 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 CD59P13987 128 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 TCP1P17987 556 aaKnown RBP10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 EPHA8P29322 1005 aaPredicted RBP10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 FDFT1P37268 417 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 PDE1BQ01064 536 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 DPTQ07507 201 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 FZD2Q14332 565 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 PPM1JQ5JR12 505 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 SIRPB2Q5JXA9 342 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 ZDHHC20Q5W0Z9 365 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 PSAPL1Q6NUJ1 521 aa10.5□□□□□ -0.73
AC012339.1-201ENST00000505564 KDELC1Q6UW63 502 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms