RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 KRT81Q14533 505 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 NFKBIBQ15653 356 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 DPYSL2Q16555 572 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 C14orf28Q4W4Y0 310 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 KCTD16Q68DU8 428 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 CSPG4P5Q96PW8 444 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 RBM15Q96T37 977 aaKnown RBP eCLIP16■□□□□ 0.154e-7■■□□□ 11.4
PDLIM7-213ENST00000505074 DPEP2Q9H4A9 486 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 RDH14Q9HBH5 336 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 ETNK2Q9NVF9 386 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 ANAPC7Q9UJX3 599 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 DGKBQ9Y6T7 804 aa16■□□□□ 0.15
PDLIM7-213ENST00000505074 ARHGEF17Q96PE2 2063 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 PRR19A6NJB7 356 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 TRAFD1O14545 582 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 NUDT21O43809 227 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 SOCS5O75159 536 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 RARAP10276 462 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 FGF3P11487 239 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 SERPINB6P35237 376 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 GJC1P36383 396 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 HSPA9P38646 679 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 ARSDP51689 593 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 MAXP61244 160 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 ITKQ08881 620 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 SEPT6Q14141 434 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 PIGHQ14442 188 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 BOLA3Q53S33 107 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 FHL5Q5TD97 284 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 PNCKQ6P2M8 343 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 POLNQ7Z5Q5 900 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 RCBTB1Q8NDN9 531 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 APOBEC4Q8WW27 367 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 SLC45A3Q96JT2 553 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 BTBD6Q96KE9 485 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 NUDCD1Q96RS6 583 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 TMEM168Q9H0V1 697 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 ISCUQ9H1K1 167 aa15.99■□□□□ 0.15
PDLIM7-213ENST00000505074 A0A1W2PQ67 120 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 PRSS38A1L453 326 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 PDE2AO00408 941 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 NKX2-8O15522 239 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 ZW10O43264 779 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 RAD1O60671 282 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 KRT7P08729 469 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 PRKAR1AP10644 381 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 CYP2A6P11509 494 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 VIPR1P32241 457 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 MMP13P45452 471 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 B4GALNT1Q00973 533 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 BIRC2Q13490 618 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 CNGA3Q16281 694 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 CLPPQ16740 277 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 TSR1Q2NL82 804 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 AMZ1Q400G9 498 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 MARC1Q5VT66 337 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 KIAA1143Q96AT1 154 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 NSMCE3Q96MG7 304 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 NUP85Q9BW27 656 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 LGR4Q9BXB1 951 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 THAP2Q9H0W7 228 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 CARS2Q9HA77 564 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 NOD2Q9HC29 1040 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 PHPT1Q9NRX4 125 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 IP6K2Q9UHH9 426 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 B3GALT1Q9Y5Z6 326 aa15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-213ENST00000505074 TNFRSF10CO14798 259 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 MAFKO60675 156 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 VPS4BO75351 444 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 MYCLP1P12525 358 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 MLLT10P55197 1068 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 CDH6P55285 790 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 CDC20Q12834 499 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 TRAF2Q12933 501 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 NR1I3Q14994 352 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 ARMC12Q5T9G4 340 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 SPECC1LQ69YQ0 1117 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 TXNRD3NBQ6F5E7 133 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 RAET1GQ6H3X3 334 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 USP45Q70EL2 814 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 HEATR4Q86WZ0 1026 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 PELI3Q8N2H9 469 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 PGBD5Q8N414 524 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 TEX19Q8NA77 164 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 CCL4L1Q8NHW4 92 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 KIAA1524Q8TCG1 905 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 SSC4DQ8WTU2 575 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 ART4Q93070 314 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 PMEPA1Q969W9 287 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 EFHD1Q9BUP0 239 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 DDA1Q9BW61 102 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 ASPSCR1Q9BZE9 553 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 GPN2Q9H9Y4 310 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 PCDH18Q9HCL0 1135 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 NT5MQ9NPB1 228 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms