RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ZNF658BQ4V348 819 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ARMC3Q5W041 872 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 STEAP4Q687X5 459 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 USP45Q70EL2 814 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ZNF765Q7L2R6 523 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PIANPQ8IYJ0 282 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 UNC5BQ8IZJ1 945 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PGBD3Q8N328 593 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ZCCHC9Q8N567 271 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 DENND6BQ8NEG7 585 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MNS1Q8NEH6 495 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CCHCR1Q8TD31 782 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 RMDN1Q96DB5 314 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SCARF2Q96GP6 870 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CDKN2AIPNLQ96HQ2 116 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PLEKHG4BQ96PX9 1271 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 FERMT1Q9BQL6 677 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 LGR4Q9BXB1 951 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 FSD1LQ9BXM9 530 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TEX101Q9BY14 249 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 FUT8Q9BYC5 575 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TRIM31Q9BZY9 425 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 IL22Q9GZX6 179 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 DPH5Q9H2P9 285 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SUDS3Q9H7L9 328 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MRM3Q9HC36 420 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 EPB41L5Q9HCM4 733 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 XAB2Q9HCS7 855 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 FZD3Q9NPG1 666 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 HAUS2Q9NVX0 235 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 NLE1Q9NVX2 485 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SMOXQ9NWM0 555 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MOCS1Q9NZB8 636 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 HACD3Q9P035 362 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 BCCIPQ9P287 314 aaKnown RBP eCLIP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SOX13Q9UN79 622 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CA5BQ9Y2D0 317 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TCAF1Q9Y4C2 921 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ASCC3Q8N3C0 2202 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 FAM186AA6NE01 2351 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3DA0A087WVF3 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3IA0A087WXS9 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3EA0A087X179 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3KA0A087X1G2 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 FAM237BA0A1B0GVD1 139 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 RGSL1A5PLK6 1076 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3FA6NER0 549 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 LRRC72A6NJI9 287 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3LB9A6J9 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SMAPO00193 183 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 CTIFO43310 598 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TM7SF2O76062 418 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 USP1O94782 785 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SLU7O95391 586 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 HOXC4P09017 264 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 FAM153BP0C7A2 387 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 ELFN1P0C7U0 828 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3HP0C7X1 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 GIMD1P0DJR0 217 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 CYP2A6P11509 494 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 LPOP22079 712 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 CA4P22748 312 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 ADRA1DP25100 572 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 CD27P26842 260 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 GABRB3P28472 473 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 MAT2AP31153 395 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 ACTN2P35609 894 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 NPY2RP49146 381 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SESN2P58004 480 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 GPX6P59796 221 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 RPL6Q02878 288 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 LAPTM4AQ15012 233 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 IRF4Q15306 451 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SHBQ15464 509 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 ERCC6LQ2NKX8 1250 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 FAM153CQ494X1 144 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 ATP13A5Q4VNC0 1218 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 PCID2Q5JVF3 399 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TSTD2Q5T7W7 516 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3GQ6DHY5 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3CQ6IPX1 549 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 PSAPL1Q6NUJ1 521 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 WDR93Q6P2C0 686 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 PNCKQ6P2M8 343 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TRMT10BQ6PF06 316 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 LAYNQ6UX15 382 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SLC36A4Q6YBV0 504 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 KANSL1Q7Z3B3 1105 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 C11orf96Q7Z7L8 435 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SPATS2Q86XZ4 545 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBC1D3Q8IZP1 549 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 DEFB119Q8N690 84 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 EIF1ADQ8N9N8 165 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 OR4K2Q8NGD2 314 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 BLOC1S5Q8TDH9 187 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 KLK6Q92876 244 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 LRRC45Q96CN5 670 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 IFT43Q96FT9 208 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms