RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 Q6ZVU0 165 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 CLNKQ7Z7G1 428 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3Q8IZP1 549 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 AP2M1Q96CW1 435 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 CDH19Q9H159 772 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 YY1AP1Q9H869 796 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 GRIN2DO15399 1336 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 SLC7A4O43246 635 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 AHSGP02765 367 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ITPKAP23677 461 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 PSMA4P25789 261 aaKnown RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 PIK3R6Q5UE93 754 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 KIAA0930Q6ICG6 404 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TAS1R1Q7RTX1 841 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 OOSP2Q86WS3 158 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF781Q8N8C0 355 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ATG10Q9H0Y0 220 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 FAM83DQ9H4H8 585 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TDP1Q9NUW8 608 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 FBXL21Q9UKT6 434 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 F5P12259 2224 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 UBXN8O00124 270 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 NBNO60934 754 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 MTX2O75431 263 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF682O95780 498 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 PABPC1P11940 636 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 SPAM1P38567 509 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 PSMD8P48556 350 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 FRG1Q14331 258 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 PLA2G4EQ3MJ16 856 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 TRNP1Q6NT89 227 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 DNAJB14Q8TBM8 379 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 SIKE1Q9BRV8 207 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 SLC25A23Q9BV35 468 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 MIEF1Q9NQG6 463 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 TLR9Q9NR96 1032 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ASF1AQ9Y294 204 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 DTNAQ9Y4J8 743 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 LAMB2P55268 1798 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 COL24A1Q17RW2 1714 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 DCLK1O15075 740 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 COX4I1P13073 169 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF23P17027 643 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 DEFB103AP81534 67 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 KLC1Q07866 573 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 SIDT2Q8NBJ9 832 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 RCN3Q96D15 328 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 CDKN2AIPNLQ96HQ2 116 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ELAC1Q9H777 363 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 M0QZQ0 153 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 MAPK9P45984 424 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 RPL38P63173 70 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 MRPS22P82650 360 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 CLYBLQ8N0X4 340 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 FIG4Q92562 907 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 FAM120BQ96EK7 910 aaKnown RBP14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF778Q96MU6 729 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 OSBPL7Q9BZF2 842 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 SNX8Q9Y5X2 465 aa14.06□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF840PA6NDX5 716 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 NIPSNAP2O75323 286 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 WDR47O94967 919 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 FSBPO95073 299 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 ME2P23368 584 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 MAPK1P28482 360 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SEC13P55735 322 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SFSWAPQ12872 951 aaKnown RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 PREPLQ4J6C6 727 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 LYSMD3Q7Z3D4 306 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 PACS2Q86VP3 889 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 UBR7Q8N806 425 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 GPR156Q8NFN8 814 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SLC12A4Q9UP95 1085 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 GPSM3Q9Y4H4 160 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 NTRK1P04629 796 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 CHRNGP07510 517 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 NCALDP61601 193 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 KRT72Q14CN4 511 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 RBM20Q5T481 1227 aaKnown RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 ISLR2Q6UXK2 745 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 UBE2R2Q712K3 238 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SCD5Q86SK9 330 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 CLDN19Q8N6F1 224 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 PNPLA1Q8N8W4 532 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 RDH11Q8TC12 318 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 ACDQ96AP0 544 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 OTULINQ96BN8 352 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 FEM1CQ96JP0 617 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 HEPHQ9BQS7 1158 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 RMND5AQ9H871 391 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 COPS7BQ9H9Q2 264 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 FAM159BA6NKW6 160 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 KDM1AO60341 852 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms