RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 CCDC3Q9BQI4 270 aa13.63□□□□□ -0.23
HOXC6-203ENST00000504315 SLC25A51Q9H1U9 297 aa13.63□□□□□ -0.23
HOXC6-203ENST00000504315 CYP4F12Q9HCS2 524 aa13.63□□□□□ -0.23
HOXC6-203ENST00000504315 ENTPD2Q9Y5L3 495 aa13.63□□□□□ -0.23
HOXC6-203ENST00000504315 hCG_1818297A0A087WSY0 165 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 RCCD1A6NED2 376 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 BRINP1O60477 761 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 CST8O60676 142 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 CLDN7O95471 211 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 TNNT1P13805 278 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 PECAM1P16284 738 aaPredicted RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 PTPN3P26045 913 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 LSSP48449 732 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 MARCKSL1P49006 195 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 DYNLT1P63172 113 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 ADCY2Q08462 1091 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 TCEA2Q15560 299 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 PPP2R5EQ16537 467 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 CERCAMQ5T4B2 595 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 HENMT1Q5T8I9 393 aaKnown RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 TAF8Q7Z7C8 310 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 NT5DC3Q86UY8 548 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 C17orf82Q86X59 251 aaPredicted RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 NRROSQ86YC3 692 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 RCOR2Q8IZ40 523 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 EXD1Q8NHP7 514 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 SCAMP4Q969E2 229 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 CCDC74AQ96AQ1 378 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 TEKT5Q96M29 485 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 AGAP3Q96P47 875 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 WDR24Q96S15 920 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 MLPHQ9BV36 600 aaPredicted RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 CARS2Q9HA77 564 aaKnown RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 SIRPGQ9P1W8 387 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 GULP1Q9UBP9 304 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 CD84Q9UIB8 345 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 RABGEF1Q9UJ41 708 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 APPL1Q9UKG1 709 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 SUFUQ9UMX1 484 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 REXO2Q9Y3B8 237 aaKnown RBP13.62□□□□□ -0.23
HOXC6-203ENST00000504315 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
HOXC6-203ENST00000504315 C1orf232A0A0U1RR37 186 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 ZRANB2O95218 330 aaKnown RBP eCLIP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 GLB1P16278 677 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 CTNNA1P35221 906 aaKnown RBP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 SPINT3P49223 89 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 WASHC5Q12768 1159 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 HLTFQ14527 1009 aaKnown RBP eCLIP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 TBC1D25Q3MII6 688 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 C14orf28Q4W4Y0 310 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 RAD9BQ6WBX8 426 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 TMEM139Q8IV31 216 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 FAM46DQ8NEK8 389 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 TFB1MQ8WVM0 346 aaKnown RBP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 KRT35Q92764 455 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 EID2BQ96D98 161 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 RBM41Q96IZ5 413 aaKnown RBP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 GSDMCQ9BYG8 508 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 CEP41Q9BYV8 373 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 POLR1BQ9H9Y6 1135 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 NFKBIL1Q9UBC1 381 aaPredicted RBP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 SAE1Q9UBE0 346 aaPredicted RBP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
HOXC6-203ENST00000504315 ST14Q9Y5Y6 855 aa13.61□□□□□ -0.23
HOXC6-203ENST00000504315 A0A1W2PNU3 283 aaPredicted RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 A0A1W2PQM1 296 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 GOLGA6CA6NDK9 693 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 GOLGA6BA6NDN3 693 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 CASC3O15234 703 aaKnown RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 PJA2O43164 708 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 MTSS1O43312 755 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 NUDT21O43809 227 aaKnown RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 USP12O75317 370 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 GOLGA6DP0CG33 693 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 CD68P34810 354 aaPredicted RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 EIF2S3P41091 472 aaKnown RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 COPS2P61201 443 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 ILF3Q12906 894 aaKnown RBP eCLIP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 SPIDRQ14159 915 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 ITPR1Q14643 2758 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 NR1D2Q14995 579 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 ZNF438Q7Z4V0 828 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 DAAM2Q86T65 1068 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 SFTPA2Q8IWL1 248 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 LSMEM2Q8N112 164 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 P3H4Q92791 437 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 FGF11Q92914 225 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 HIC2Q96JB3 615 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 ZNF578Q96N58 590 aaPredicted RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 VAT1Q99536 393 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
HOXC6-203ENST00000504315 GLOD4Q9HC38 313 aa13.6□□□□□ -0.23
HOXC6-203ENST00000504315 MAGEE1Q9HCI5 957 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms