RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ABHD10Q9NUJ1 306 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 TRNAU1APQ9NX07 287 aaKnown RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 DNPEPQ9ULA0 475 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RPL26L1Q9UNX3 145 aaKnown RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 PCDHGA8Q9Y5G5 932 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 HEY1Q9Y5J3 304 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 CCDC187A0A096LP49 1063 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 LRRD1A4D1F6 860 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 J3QKU1 62 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 NUDT21O43809 227 aaKnown RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 TNFSF15O95150 251 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 FUCA1P04066 466 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 RPLP0P05388 317 aaKnown RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 ZFXP17010 805 aaPredicted RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 LHCGRP22888 699 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 SLC1A1P43005 524 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 GNPDA1P46926 289 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 GBE1Q04446 702 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 EIF3IQ13347 325 aaKnown RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 LY6DQ14210 128 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 PTPRRQ15256 657 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 C14orf28Q4W4Y0 310 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 CERCAMQ5T4B2 595 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 KCTD16Q68DU8 428 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 ALG1LQ6GMV1 187 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 CPNE8Q86YQ8 564 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 CNGA4Q8IV77 575 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 PELI3Q8N2H9 469 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 FBXO39Q8N4B4 442 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 EXD1Q8NHP7 514 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 CCL4L1Q8NHW4 92 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 ARRDC2Q8TBH0 407 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 CCHCR1Q8TD31 782 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 LRRN4Q8WUT4 740 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 KCNE4Q8WWG9 221 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 MLPHQ9BV36 600 aaPredicted RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 ABCG8Q9H221 673 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 SUDS3Q9H7L9 328 aaPredicted RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 PCDH9Q9HC56 1237 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
MED28-203ENST00000503945 DTLQ9NZJ0 730 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 CD84Q9UIB8 345 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 INTUQ9ULD6 942 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 SUFUQ9UMX1 484 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
MED28-203ENST00000503945 A0A0U1RQS6 177 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 A0A1W2PQM1 296 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 CAPN8A6NHC0 703 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 RHPN2P1A8MT19 583 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 ZNF487B1APH4 448 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 B4DGG1 531 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 ANKRD66B4E2M5 251 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 AKR1B15C9JRZ8 316 aaPredicted RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 APOL1O14791 398 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 NOBOXO60393 691 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 CLDN7O95471 211 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 PRLP01236 227 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 FGF1P05230 155 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 TNNT1P13805 278 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 ALDH4A1P30038 563 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 MLLT3P42568 568 aaPredicted RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 POLD2P49005 469 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 UCNP55089 124 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 INHBCP55103 352 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 PPIDQ08752 370 aaKnown RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 VAC14Q08AM6 782 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 NIPAL4Q0D2K0 466 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 AP1B1Q10567 949 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 HLTFQ14527 1009 aaKnown RBP eCLIP11.91□□□□□ -0.5
MED28-203ENST00000503945 PDK1Q15118 436 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 LRRC38Q5VT99 294 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 CCDC70Q6NSX1 233 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 BZW1Q7L1Q6 419 aaKnown RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 RAB11FIP2Q7L804 512 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 VSIG1Q86XK7 387 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 RHOT1Q8IXI2 618 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 ZDHHC1Q8WTX9 485 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 TTC9Q92623 222 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 SCAMP4Q969E2 229 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 HDAC11Q96DB2 347 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 PRR11Q96HE9 360 aaPredicted RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 FRMD8Q9BZ67 464 aaPredicted RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 BRD8Q9H0E9 1235 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 EPB41L5Q9HCM4 733 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 DDX56Q9NY93 547 aaKnown RBP11.91□□□□□ -0.5
MED28-203ENST00000503945 SLC17A4Q9Y2C5 497 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 TMEM98Q9Y2Y6 226 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 RNF215Q9Y6U7 377 aa11.91□□□□□ -0.5
MED28-203ENST00000503945 PMS2P1A4D2B8 440 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 RGSL1A5PLK6 1076 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 KCNK1O00180 336 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 PLD2O14939 933 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 MFAP3LO75121 409 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 MTA2O94776 668 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 ASMTLO95671 621 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 HLA-DQB2P05538 268 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms