RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MAGEC1O60732 1142 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 SUN1O94901 812 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 CER1O95813 267 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 PTGIRP43119 386 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 MRPS25P82663 173 aaKnown RBP16.43■□□□□ 0.22
SCLT1-205ENST00000503401 DPTQ07507 201 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 C2orf54Q08AI8 447 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 FZD2Q14332 565 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 POU6F1Q14863 301 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 STPG1Q5TH74 334 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 IL27RAQ6UWB1 636 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 LINC00523Q86TU6 105 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 HEATR4Q86WZ0 1026 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 DNAAF3Q8N9W5 541 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 FAM174AQ8TBP5 190 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 KRT12Q99456 494 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 FAM83DQ9H4H8 585 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 WDR26Q9H7D7 661 aa16.43■□□□□ 0.22
SCLT1-205ENST00000503401 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCLT1-205ENST00000503401 PNMA8BQ9ULN7 279 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-205ENST00000503401 SPTY2D1-AS1A0A0U1RR47 76 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 CCDC78A2IDD5 438 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 FADS2P1A8MWK0 482 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 CCDC188H7C350 402 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 FOXD2O60548 495 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-205ENST00000503401 TSHRP16473 764 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 TRIM23P36406 574 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 YPEL5P62699 121 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 NFATC4Q14934 902 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 ZNF423Q2M1K9 1284 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 CERCAMQ5T4B2 595 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 HENMT1Q5T8I9 393 aaKnown RBP16.42■□□□□ 0.22
SCLT1-205ENST00000503401 ANKRD22Q5VYY1 191 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 KCTD16Q68DU8 428 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 ZNF765Q7L2R6 523 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 TRIM74Q86UV6 250 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 SPATA4Q8NEY3 305 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 BRSK1Q8TDC3 778 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 ELF4Q99607 663 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-205ENST00000503401 KCTD5Q9NXV2 234 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 IL17CQ9P0M4 197 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 FEZ2Q9UHY8 353 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-205ENST00000503401 KLF15Q9UIH9 416 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 LRP4O75096 1905 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 SPTBN4Q9H254 2564 aa16.42■□□□□ 0.22
SCLT1-205ENST00000503401 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 SCAMP1O15126 338 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 INPP4BO15327 924 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 SDC3O75056 442 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 HOXD11P31277 338 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TMPRSS15P98073 1019 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CDK3Q00526 305 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 DR1Q01658 176 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CDH17Q12864 832 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 SEPT6Q14141 434 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 KCNJ11Q14654 390 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 SHBQ15464 509 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TAF1AQ15573 450 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CCDC38Q502W7 563 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 ENPP7Q6UWV6 458 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 MICALCLQ6ZW33 695 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 OR4K2Q8NGD2 314 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 OR13C4Q8NGS5 318 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CPT1BQ92523 772 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TRIM51Q9BSJ1 452 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 SPATA16Q9BXB7 569 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CASS4Q9NQ75 786 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 EIF2B3Q9NR50 452 aaKnown RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 DNAJC28Q9NX36 388 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 ASIC3Q9UHC3 531 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CDC23Q9UJX2 597 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 PKP3Q9Y446 797 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 ZNF106Q9H2Y7 1883 aaKnown RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 RGSL1A5PLK6 1076 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TMEM202A6NGA9 273 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 C2orf81A6NN90 581 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CACNB4O00305 520 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 CCL22O00626 93 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 STX7O15400 261 aaKnown RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TTI1O43156 1089 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 GPR39O43194 453 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 LDB2O43679 373 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 LPOP22079 712 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 BNIP3Q12983 259 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 EIF2B5Q13144 721 aaKnown RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 PTK6Q13882 451 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 PTK2BQ14289 1009 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TCEA2Q15560 299 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 FAM151BQ6UXP7 276 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 MACC1Q6ZN28 852 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 ZNF534Q76KX8 674 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 PARGQ86W56 976 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 DCP2Q8IU60 420 aaKnown RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TSACCQ96A04 125 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TEX101Q9BY14 249 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 TCEAL2Q9H3H9 227 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-205ENST00000503401 ERVMER34-1Q9H9K5 563 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 ARFGAP3Q9NP61 516 aa16.41■□□□□ 0.22
SCLT1-205ENST00000503401 MRPL40Q9NQ50 206 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms