RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 CRB1P82279 1406 aa5.9□□□□□ -1.47
NIPBL-203ENST00000503274 PHRF1Q9P1Y6 1649 aaKnown RBP5.89□□□□□ -1.47
NIPBL-203ENST00000503274 QRICH2Q9H0J4 1663 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 CAMTA1Q9Y6Y1 1673 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 RGPD1P0DJD0 1748 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 A0A1W2PPH5 198 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 J3KRW8 73 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 WNT9BO14905 357 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 CH25HO95992 272 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 MMP2P08253 660 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 UBL4AP11441 157 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 CD58P19256 250 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 GPTP24298 496 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 HARS2P49590 506 aaKnown RBP5.89□□□□□ -1.47
NIPBL-203ENST00000503274 TRAF3Q13114 568 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 HLFQ16534 295 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 GSTA3Q16772 222 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 SGO1Q5FBB7 561 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 SCCPDHQ8NBX0 429 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 CADM4Q8NFZ8 388 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 MED30Q96HR3 178 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 MMTAG2Q9BU76 263 aaKnown RBP5.89□□□□□ -1.47
NIPBL-203ENST00000503274 PCDHB16Q9NRJ7 776 aa5.89□□□□□ -1.47
NIPBL-203ENST00000503274 CRYBG1Q9Y4K1 1723 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 LINC01553A4QN01 128 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 LRRC53A6NM62 1247 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 IFNL4K9M1U5 179 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 SEC14L5O43304 696 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 SLC28A2O43868 658 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 SEC31AO94979 1220 aaKnown RBP5.88□□□□□ -1.47
NIPBL-203ENST00000503274 PAX3P23760 479 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 ITGB8P26012 769 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 TNFRSF8P28908 595 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 SHMT1P34896 483 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 BNC1Q01954 994 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 NEDD9Q14511 834 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 ATF7IPQ6VMQ6 1270 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 BEST2Q8NFU1 509 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 PDCL3Q9H2J4 239 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 DDX4Q9NQI0 724 aaKnown RBP5.88□□□□□ -1.47
NIPBL-203ENST00000503274 SELENONQ9NZV5 590 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 COL5A2P05997 1499 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-203ENST00000503274 NRKQ7Z2Y5 1582 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 TRPM1Q7Z4N2 1603 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 THSD7AQ9UPZ6 1657 aa5.88□□□□□ -1.47
NIPBL-203ENST00000503274 USP17L23D6RBM5 183 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 PROB1E7EW31 1015 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 HSPA12AO43301 675 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 HOXB5P09067 269 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 FCGR1AP12314 374 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 DSCR9P59020 149 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 MPP1Q00013 466 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 FBXO46Q6PJ61 603 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-203ENST00000503274 LCTLQ6UWM7 567 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 MEPCEQ7L2J0 689 aaKnown RBP5.87□□□□□ -1.47
NIPBL-203ENST00000503274 LINGO2Q7L985 606 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 ZC3HC1Q86WB0 502 aaKnown RBP5.87□□□□□ -1.47
NIPBL-203ENST00000503274 AGBL3Q8NEM8 1001 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 METTL6Q8TCB7 284 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 NUDCD2Q8WVJ2 157 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 TMED6Q8WW62 240 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 EVI5LQ96CN4 794 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 MEIS3Q99687 375 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 CHMP4AQ9BY43 222 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 PRKRIP1Q9H875 184 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-203ENST00000503274 IRAK4Q9NWZ3 460 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 CCDC7Q96M83 1385 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 OVOS2A0A0G2JMS6 1433 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 OVOS2A0A0J9YW53 1432 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 OVOS2Q6IE36 1432 aa5.87□□□□□ -1.47
NIPBL-203ENST00000503274 SLIT3O75094 1523 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 CPSF1Q10570 1443 aaKnown RBP5.86□□□□□ -1.47
NIPBL-203ENST00000503274 NINLQ9Y2I6 1382 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 UTYO14607 1347 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 IGLV5-52A0A0A0MRZ9 124 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 A0A0U1RQJ8 604 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 ZIC3O60481 467 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 RTN3O95197 1032 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-203ENST00000503274 PLA2G2AP14555 144 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 ZNF12P17014 697 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 CCR9P51686 369 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 SEC61A1P61619 476 aaKnown RBP5.86□□□□□ -1.47
NIPBL-203ENST00000503274 ZNF585BQ52M93 769 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 CDC73Q6P1J9 531 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 SLC35F3Q8IY50 421 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 WASF1Q92558 559 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 PABPC5Q96DU9 382 aaKnown RBP5.86□□□□□ -1.47
NIPBL-203ENST00000503274 SLITRK1Q96PX8 696 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 TM6SF1Q9BZW5 370 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 ZNF69Q9UC07 566 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 CDC14AQ9UNH5 594 aa5.86□□□□□ -1.47
NIPBL-203ENST00000503274 LMO7Q8WWI1 1683 aa5.85□□□□□ -1.47
NIPBL-203ENST00000503274 TMEM202A6NGA9 273 aa5.85□□□□□ -1.47
NIPBL-203ENST00000503274 EPB41L2O43491 1005 aaKnown RBP5.85□□□□□ -1.47
NIPBL-203ENST00000503274 PAPSS2O95340 614 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-203ENST00000503274 HNRNPH1P31943 449 aaKnown RBP5.85□□□□□ -1.47
NIPBL-203ENST00000503274 CDAP32320 146 aa5.85□□□□□ -1.47
NIPBL-203ENST00000503274 TSTQ16762 297 aaKnown RBP5.85□□□□□ -1.47
NIPBL-203ENST00000503274 MMEL1Q495T6 779 aa5.85□□□□□ -1.47
NIPBL-203ENST00000503274 KIAA1161Q6NSJ0 714 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms