RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 DPTQ07507 201 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 ZBTB17Q13105 803 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 TIGD7Q6NT04 549 aaPredicted RBP16.2■□□□□ 0.18
SCLT1-204ENST00000503215 SLC30A9Q6PML9 568 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 IGF2-ASQ6U949 168 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 NPNTQ6UXI9 565 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 SPRED1Q7Z699 444 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 MAP7D3Q8IWC1 876 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 LPCAT1Q8NF37 534 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 WDR48Q8TAF3 677 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 FATE1Q969F0 183 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 AP2M1Q96CW1 435 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 WDR24Q96S15 920 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 RIOK2Q9BVS4 552 aaKnown RBP16.2■□□□□ 0.18
SCLT1-204ENST00000503215 CEP41Q9BYV8 373 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 TSPY26PQ9H489 355 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 TAAR2Q9P1P5 351 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 APPL1Q9UKG1 709 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 SLC17A4Q9Y2C5 497 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 CBFA2T2O43439 604 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 MFAP3LO75121 409 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 CD86P42081 329 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 EPHB1P54762 984 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 INHBCP55103 352 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 OR1D5P58170 312 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 B4GALNT1Q00973 533 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 CTBSQ01459 385 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 PCSK4Q6UW60 755 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 MARK2Q7KZI7 788 aaKnown RBP16.19■□□□□ 0.18
SCLT1-204ENST00000503215 GPR155Q7Z3F1 870 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 C17orf82Q86X59 251 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-204ENST00000503215 CCDC13Q8IYE1 715 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 ZDHHC1Q8WTX9 485 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 HDAC11Q96DB2 347 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 LIN37Q96GY3 246 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-204ENST00000503215 BRD8Q9H0E9 1235 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 PCDH9Q9HC56 1237 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 ZNHIT6Q9NWK9 470 aaKnown RBP16.19■□□□□ 0.18
SCLT1-204ENST00000503215 HEY1Q9Y5J3 304 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 AHCTF1Q8WYP5 2266 aa16.19■□□□□ 0.18
SCLT1-204ENST00000503215 CAPN8A6NHC0 703 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 PLD2O14939 933 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 INPP4BO15327 924 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 ECEL1O95672 775 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 IVLP07476 585 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 TNNT1P13805 278 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 MX2P20592 715 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 PTMSP20962 102 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 NFKBIAP25963 317 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 TEAD1P28347 426 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 UGT1A5P35504 534 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 ZFP36L1Q07352 338 aaKnown RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 PPIDQ08752 370 aaKnown RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 TRIM14Q14142 442 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 QPCTQ16769 361 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 TSR1Q2NL82 804 aaKnown RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 SKOR2Q2VWA4 1001 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 ARHGAP40Q5TG30 622 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 ADAMTSL4Q6UY14 1074 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 USP53Q70EK8 1073 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 RAB11FIP2Q7L804 512 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 FBXO39Q8N4B4 442 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 ARL14Q8N4G2 192 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 OR6C4Q8NGE1 309 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 RNF25Q96BH1 459 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 SCARF2Q96GP6 870 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 UBL7Q96S82 380 aaPredicted RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 GSDMCQ9BYG8 508 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 SEMA6CQ9H3T2 930 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 RDH14Q9HBH5 336 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 TRNAU1APQ9NX07 287 aaKnown RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 KCTD5Q9NXV2 234 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 CNOT6Q9ULM6 557 aaKnown RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
SCLT1-204ENST00000503215 OAS3Q9Y6K5 1087 aaKnown RBP16.18■□□□□ 0.18
SCLT1-204ENST00000503215 NUDT21O43809 227 aaKnown RBP16.17■□□□□ 0.18
SCLT1-204ENST00000503215 MTA2O94776 668 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 CES1P23141 567 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 CCKBRP32239 447 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 ILF3Q12906 894 aaKnown RBP eCLIP16.17■□□□□ 0.18
SCLT1-204ENST00000503215 AMZ1Q400G9 498 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 SLC9A4Q6AI14 798 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 KDELC2Q7Z4H8 507 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 CLEC14AQ86T13 490 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 NAGSQ8N159 534 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 EID2BQ96D98 161 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 CCDC42Q96M95 316 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 AMACRQ9UHK6 382 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 PRKAB1Q9Y478 270 aa16.17■□□□□ 0.18
SCLT1-204ENST00000503215 TRBV23OR9-2A0A075B6M9 112 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 FADS2P1A8MWK0 482 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 PPM1DO15297 605 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 C1QL1O75973 258 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 EML2O95834 649 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 KRT1P04264 644 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ATP1A1P05023 1023 aaKnown RBP16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ITGA2BP08514 1039 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 PNLIPP16233 465 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ZNF30P17039 623 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms