RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SEPT5Q99719 369 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ZDHHC7Q9NXF8 308 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 OAZ3Q9UMX2 235 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 A0A1B0GVG6 124 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PIPSLA2A3N6 862 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 IFRD1O00458 451 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 GM2AP17900 193 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 MYL12AP19105 171 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 CCT3P49368 545 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 GRPEL2Q8TAA5 225 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 MCOLN3Q8TDD5 553 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 RNFT2Q96EX2 444 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 POLR1EQ9GZS1 481 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 SPRTNQ9H040 489 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 HTRA2O43464 458 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 THP07101 528 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 TSPAN19P0C672 248 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 FGFR1P11362 822 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 MAGP20916 626 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 MZF1P28698 734 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 ADRA1BP35368 520 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 COX10Q12887 443 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 TUBA3CQ13748 450 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 INTS6LQ5JSJ4 861 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 HECTD2Q5U5R9 776 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 CLEC6AQ6EIG7 209 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 ZNF544Q6NX49 715 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 KLHL35Q6PF15 583 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 GLT6D1Q7Z4J2 308 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SUN5Q8TC36 379 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SPATA17Q96L03 361 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 AGAP2Q99490 1192 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SERHL2Q9H4I8 314 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 KAT8Q9H7Z6 458 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SERHLQ9NQF3 203 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 FAIMQ9NVQ4 179 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 KLQ9UEF7 1012 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 GNG14A0A1W2PPG7 69 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 ABCB1P08183 1280 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 IGFBP5P24593 272 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 COPZ1P61923 177 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 PWP1Q13610 501 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 PPP4R4Q6NUP7 873 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 PPM1MQ96MI6 270 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 KLHL32Q96NJ5 620 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 GLOD4Q9HC38 313 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 CARD8Q9Y2G2 431 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 BMP10O95393 424 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 CD86P42081 329 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 OGDHQ02218 1023 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 STK40Q8N2I9 435 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 CLN6Q9NWW5 311 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 DTLQ9NZJ0 730 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SPATA2Q9UM82 520 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 PEX16Q9Y5Y5 336 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 ZNF142P52746 1687 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 SLIT2O94813 1529 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 H3BRB1 525 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 EFCAB14O75071 495 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 LRIG2O94898 1065 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 ARL2P36404 184 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 OGFOD2Q6N063 350 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 TMEM214Q6NUQ4 689 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 LPCAT1Q8NF37 534 aa17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 PRICKLE1Q96MT3 831 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 TUT1Q9H6E5 874 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-201ENST00000502717 UBXN8O00124 270 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 AKAP5P24588 427 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 EFEMP1Q12805 493 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 HS6ST3Q8IZP7 471 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 RAB42Q8N4Z0 105 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 ING3Q9NXR8 418 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 SLC28A1O00337 649 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 TOR1BO14657 336 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 CYP4B1P13584 511 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 ARL4DP49703 201 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 RPL38P63173 70 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 MRPS31Q92665 395 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 SAMD4AQ9UPU9 718 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 ERGIC3Q9Y282 383 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 ULK1O75385 1050 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 FTH1P02794 183 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 UGT2B4P06133 528 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 CDHR3Q6ZTQ4 885 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 RALGPS2Q86X27 583 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 RIOX2Q8IUF8 465 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 ZDHHC14Q8IZN3 488 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 HEXDCQ8WVB3 486 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 FAM126AQ9BYI3 521 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 PLK4O00444 970 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 B4GALT5O43286 388 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 OTCP00480 354 aa17.18■□□□□ 0.34
HMGXB3-201ENST00000502717 POLR2EP19388 210 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms