RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CD84Q9UIB8 345 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 CROTQ9UKG9 612 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 POLHQ9Y253 713 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 PRKAB1Q9Y478 270 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 TMEM184BQ9Y519 407 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 OAS3Q9Y6K5 1087 aaKnown RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 PIPSLA2A3N6 862 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 GTPBP10A4D1E9 387 aaKnown RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 CFAP69A5D8W1 941 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 DFFAO00273 331 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 CCP110O43303 1012 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 PRAMEF11O60813 436 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 GFPT2O94808 682 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 ASMTLO95671 621 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 LSM8O95777 96 aaKnown RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 EML2O95834 649 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 DLGAP3O95886 979 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 TNFAIP3P21580 790 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 GPD1P21695 349 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 VIPR1P32241 457 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 RFC1P35251 1148 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 PTPN9P43378 593 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 TPI1P60174 286 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 POLR2LP62875 67 aaKnown RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 GPLD1P80108 840 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 CDK3Q00526 305 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 CHAF1BQ13112 559 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 MRPL49Q13405 166 aaKnown RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 NADK2Q4G0N4 442 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 AFMIDQ63HM1 303 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 ARHGAP36Q6ZRI8 547 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 RFLNAQ6ZTI6 216 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 Q6ZVL8 140 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 ARHGAP22Q7Z5H3 698 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 HSD11B1LQ7Z5J1 315 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 UMODL1-AS1Q8N2C9 162 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 ESX1Q8N693 406 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 PRR7Q8TB68 274 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 OR2M4Q96R27 311 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 SELENOOQ9BVL4 669 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 TEX101Q9BY14 249 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 SLC39A8Q9C0K1 460 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 TRIT1Q9H3H1 467 aaKnown RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 SP110Q9HB58 689 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 FBXO8Q9NRD0 319 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 RCOR3Q9P2K3 495 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 ZNHIT2Q9UHR6 403 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
CCDC171-209ENST00000498725 TEP1Q99973 2627 aaKnown RBP9.08□□□□□ -0.96
CCDC171-209ENST00000498725 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 SPENQ96T58 3664 aaKnown RBP9.07□□□□□ -0.96
CCDC171-209ENST00000498725 A6NCN8 305 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 ARHGAP42A6NI28 874 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 INPP4BO15327 924 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 SNX2O60749 519 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 KIAA0754O94854 1291 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 CPP00450 1065 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 KRT3P12035 628 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 CTPS1P17812 591 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 DCTP40126 519 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 GPR1P46091 355 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 SEPHS1P49903 392 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 HHEXQ03014 270 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 SQSTM1Q13501 440 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 PEX6Q13608 980 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 PRR30Q53SZ7 412 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-209ENST00000498725 WDR59Q6PJI9 974 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 C6orf15Q6UXA7 325 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-209ENST00000498725 ARCQ7LC44 396 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 CHST15Q7LFX5 561 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-209ENST00000498725 TSPAN33Q86UF1 283 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 RASGRP3Q8IV61 690 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 EPS8L1Q8TE68 723 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 CENPIQ92674 756 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-209ENST00000498725 NTAN1Q96AB6 310 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 ECHDC3Q96DC8 303 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 STAMBPL1Q96FJ0 436 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 DTD2Q96FN9 168 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 ZPBPQ9BS86 351 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 TBC1D10AQ9BXI6 508 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 TRIM55Q9BYV6 548 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 LRRC19Q9H756 370 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 RWDD2AQ9UIY3 292 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 KCND3Q9UK17 655 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 FZD10Q9ULW2 581 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 UNC79Q9P2D8 2635 aa9.07□□□□□ -0.96
CCDC171-209ENST00000498725 SPTBN1Q01082 2364 aaKnown RBP9.07□□□□□ -0.96
CCDC171-209ENST00000498725 WASH4PA8MWX3 477 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 TRAFD1O14545 582 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 DAPK3O43293 454 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 HEXIM1O94992 359 aaKnown RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CLDN1O95832 211 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 IVLP07476 585 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CHRNB2P17787 502 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 MMP8P22894 467 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CASP14P31944 242 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CSNK1DP48730 415 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms