RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CALR3Q96L12 384 aaKnown RBP18.34■□□□□ 0.53
HOXD11-202ENST00000498438 TRIB3Q96RU7 358 aa18.34■□□□□ 0.53
HOXD11-202ENST00000498438 MLPHQ9BV36 600 aaPredicted RBP18.34■□□□□ 0.53
HOXD11-202ENST00000498438 HEMGNQ9BXL5 484 aa18.34■□□□□ 0.53
HOXD11-202ENST00000498438 ADGRE3Q9BY15 652 aa18.34■□□□□ 0.53
HOXD11-202ENST00000498438 FRMD8Q9BZ67 464 aaPredicted RBP18.34■□□□□ 0.53
HOXD11-202ENST00000498438 SUDS3Q9H7L9 328 aaPredicted RBP18.34■□□□□ 0.53
HOXD11-202ENST00000498438 CARS2Q9HA77 564 aaKnown RBP18.34■□□□□ 0.53
HOXD11-202ENST00000498438 GLOD4Q9HC38 313 aa18.34■□□□□ 0.53
HOXD11-202ENST00000498438 IMPACTQ9P2X3 320 aa18.34■□□□□ 0.53
HOXD11-202ENST00000498438 LAMA5O15230 3695 aa18.34■□□□□ 0.53
HOXD11-202ENST00000498438 PJA2O43164 708 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 CEACAM5P06731 702 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 SLC14A2Q15849 920 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 PCSK7Q16549 785 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 DOK6Q6PKX4 331 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 ADAMTSL4Q6UY14 1074 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 BBS12Q6ZW61 710 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 KIAA1328Q86T90 577 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 ZC3H18Q86VM9 953 aaKnown RBP18.33■□□□□ 0.52
HOXD11-202ENST00000498438 NRSN1Q8IZ57 195 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 SPATA22Q8NHS9 363 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 CCL4L1Q8NHW4 92 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 PTCD2Q8WV60 388 aaKnown RBP18.33■□□□□ 0.52
HOXD11-202ENST00000498438 TADA1Q96BN2 335 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 TEKT5Q96M29 485 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 DEPDC7Q96QD5 511 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 AGAP2Q99490 1192 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 RIOK2Q9BVS4 552 aaKnown RBP18.33■□□□□ 0.52
HOXD11-202ENST00000498438 PCDHB1Q9Y5F3 818 aa18.33■□□□□ 0.52
HOXD11-202ENST00000498438 DSPP15924 2871 aaKnown RBP18.32■□□□□ 0.52
HOXD11-202ENST00000498438 ZFHX4Q86UP3 3567 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 GRID2IPA4D2P6 1211 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 MT-CYBP00156 380 aaPredicted RBP18.32■□□□□ 0.52
HOXD11-202ENST00000498438 FUCA1P04066 466 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 CTNNA2P26232 953 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 CD68P34810 354 aaPredicted RBP18.32■□□□□ 0.52
HOXD11-202ENST00000498438 GNPDA1P46926 289 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 POLD2P49005 469 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 WASHC5Q12768 1159 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 TRIM74Q86UV6 250 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 LRRC57Q8N9N7 239 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 QKIQ96PU8 341 aaKnown RBP eCLIP18.32■□□□□ 0.52
HOXD11-202ENST00000498438 CCDC3Q9BQI4 270 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 DESI2Q9BSY9 194 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 NRSN2Q9GZP1 204 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 SUFUQ9UMX1 484 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 SLC17A4Q9Y2C5 497 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 RAXQ9Y2V3 346 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 PCDHA3Q9Y5H8 950 aa18.32■□□□□ 0.52
HOXD11-202ENST00000498438 URB1O60287 2271 aaKnown RBP18.32■□□□□ 0.52
HOXD11-202ENST00000498438 CHD6Q8TD26 2715 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 B4DGG1 531 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 APOC4-APOC2K7ER74 178 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 CASC3O15234 703 aaKnown RBP18.31■□□□□ 0.52
HOXD11-202ENST00000498438 MTSS1O43312 755 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 CSO75390 466 aaKnown RBP18.31■□□□□ 0.52
HOXD11-202ENST00000498438 APOC2P02655 101 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 PYGLP06737 847 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 PIRTP0C851 137 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 NFKB1P19838 968 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 COPS2P61201 443 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 CDK18Q07002 472 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 LYSMD3Q7Z3D4 306 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 NLRP8Q86W28 1048 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 RAVER1Q8IY67 606 aaKnown RBP18.31■□□□□ 0.52
HOXD11-202ENST00000498438 FAM46DQ8NEK8 389 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 KIAA1524Q8TCG1 905 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 CCHCR1Q8TD31 782 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 CCDC74AQ96AQ1 378 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 WDR24Q96S15 920 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 HERPUD2Q9BSE4 406 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 UBP1Q9NZI7 540 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 PKD2L2Q9NZM6 624 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 KLHL8Q9P2G9 620 aaPredicted RBP18.31■□□□□ 0.52
HOXD11-202ENST00000498438 TMEM98Q9Y2Y6 226 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 AK5Q9Y6K8 562 aa18.31■□□□□ 0.52
HOXD11-202ENST00000498438 A0A0U1RQJ8 604 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 MACROD2A1Z1Q3 448 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 HACD1B0YJ81 288 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 F5H423 210 aaPredicted RBP18.3■□□□□ 0.52
HOXD11-202ENST00000498438 INPP4BO15327 924 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 PMPCBO75439 489 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 SLC4A1P02730 911 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 IVLP07476 585 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 SPINT3P49223 89 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 ILF3Q12906 894 aaKnown RBP eCLIP18.3■□□□□ 0.52
HOXD11-202ENST00000498438 RTP5Q14D33 572 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 NOMO1Q15155 1222 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 HENMT1Q5T8I9 393 aaKnown RBP18.3■□□□□ 0.52
HOXD11-202ENST00000498438 CCDC181Q5TID7 509 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 NRROSQ86YC3 692 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 SFTPA2Q8IWL1 248 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 GPR156Q8NFN8 814 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 GPBAR1Q8TDU6 330 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 HTR3CQ8WXA8 447 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 ALG3Q92685 438 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 HIC2Q96JB3 615 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 ZFYVE1Q9HBF4 777 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms