RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CTPS1P17812 591 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 PTPN9P43378 593 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 AMTP48728 403 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ZNF75DP51815 510 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ZXDBP98169 803 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 SLC18A2Q05940 514 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 KRTAP1-1Q07627 177 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 CRYZQ08257 329 aaKnown RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 FAM27E3Q08E93 113 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 TRPC3Q13507 836 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 PPP2R5BQ15173 497 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ALX1Q15699 326 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ZSCAN25Q6NSZ9 544 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 CCDC73Q6ZRK6 1079 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 Q6ZSV7 163 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ATG9AQ7Z3C6 839 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ZNF589Q86UQ0 364 aaPredicted RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 DENND6AQ8IWF6 608 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 CEP57L1Q8IYX8 460 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 ZCCHC10Q8TBK6 192 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 FAM216AQ8WUB2 273 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 LRRC59Q96AG4 307 aaKnown RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 CAMK1GQ96NX5 476 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 CDT1Q9H211 546 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 WDR6Q9NNW5 1121 aaKnown RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 BEX4Q9NWD9 120 aaPredicted RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 PAG1Q9NWQ8 432 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 TMEM160Q9NX00 188 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 CWC25Q9NXE8 425 aaPredicted RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 PPP1R14DQ9NXH3 145 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 PA2G4Q9UQ80 394 aaKnown RBP4.97□□□□□ -1.61
SSR3-209ENST00000498205 PAM16Q9Y3D7 125 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 PCDHGB5Q9Y5G0 923 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 INSL5Q9Y5Q6 135 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
SSR3-209ENST00000498205 RTL9Q8NET4 1388 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 H3BQV1 296 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 I6L893 689 aaPredicted RBP4.96□□□□□ -1.62
SSR3-209ENST00000498205 ITM2AO43736 263 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 CEP104O60308 925 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 KINO60870 393 aaKnown RBP4.96□□□□□ -1.62
SSR3-209ENST00000498205 PCCAP05165 728 aaPredicted RBP4.96□□□□□ -1.62
SSR3-209ENST00000498205 TGFB3P10600 412 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 CKMT1AP12532 417 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 CMA1P23946 247 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 DCTDP32321 178 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 LIFRP42702 1097 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 TRAF1Q13077 416 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 HSP90AB3PQ58FF7 597 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 NAPEPLDQ6IQ20 393 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 KLHL24Q6TFL4 600 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 CPOQ8IVL8 374 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 C11orf65Q8NCR3 313 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 CCDC112Q8NEF3 446 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 OR14A16Q8NHC5 309 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 RASSF8Q8NHQ8 419 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 MRPS27Q92552 414 aaKnown RBP4.96□□□□□ -1.62
SSR3-209ENST00000498205 ZNF479Q96JC4 524 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 APOLD1Q96LR9 279 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.96□□□□□ -1.62
SSR3-209ENST00000498205 NPFFR1Q9GZQ6 430 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 LMAN2LQ9H0V9 348 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 BOLA2Q9H3K6 86 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 MROH8Q9H579 483 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 MVB12BQ9H7P6 319 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 CD93Q9NPY3 652 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 ANKRD10Q9NXR5 420 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 SLC45A1Q9Y2W3 748 aa4.96□□□□□ -1.62
SSR3-209ENST00000498205 COL5A2P05997 1499 aaPredicted RBP4.95□□□□□ -1.62
SSR3-209ENST00000498205 TIAM2Q8IVF5 1701 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 ARAP2Q8WZ64 1704 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 IGHV4-28A0A0C4DH34 117 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 EME2A4GXA9 379 aaPredicted RBP4.95□□□□□ -1.62
SSR3-209ENST00000498205 GOLGA6L9A6NEM1 432 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 TEX22C9J3V5 150 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 GOLGA6L19H0YKK7 550 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 MTA2O94776 668 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 HSPD1P10809 573 aaKnown RBP4.95□□□□□ -1.62
SSR3-209ENST00000498205 XBP1P17861 261 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 PCYT1AP49585 367 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 TUBB4BP68371 445 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 ABATP80404 500 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 LTBQ06643 244 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 TFCP2Q12800 502 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 HLFQ16534 295 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 IMMTQ16891 758 aaKnown RBP4.95□□□□□ -1.62
SSR3-209ENST00000498205 ZNF284Q2VY69 593 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 KIAA1161Q6NSJ0 714 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 C17orf99Q6UX52 265 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 TRILQ7L0X0 811 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 SPATA2LQ8IUW3 424 aaPredicted RBP4.95□□□□□ -1.62
SSR3-209ENST00000498205 SFTPA2Q8IWL1 248 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 LINC00301Q8NCQ3 95 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 GDPD5Q8WTR4 605 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 PPM1EQ8WY54 764 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 MAELQ96JY0 434 aaKnown RBP4.95□□□□□ -1.62
SSR3-209ENST00000498205 GPR63Q9BZJ6 419 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 LHPPQ9H008 270 aa4.95□□□□□ -1.62
SSR3-209ENST00000498205 TUBE1Q9UJT0 475 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms