RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 STX2P32856 288 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 SHMT1P34896 483 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 CTCFP49711 727 aaPredicted RBP2.91□□□□□ -1.94
RIF1-212ENST00000498041 RAD23BP54727 409 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 EIF3BP55884 814 aaKnown RBP2.91□□□□□ -1.94
RIF1-212ENST00000498041 DDR1Q08345 913 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 GRSF1Q12849 480 aaKnown RBP eCLIP2.91□□□□□ -1.94
RIF1-212ENST00000498041 MYBPHQ13203 477 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 DHX34Q14147 1143 aaKnown RBP2.91□□□□□ -1.94
RIF1-212ENST00000498041 EFNB3Q15768 340 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 CALCRLQ16602 461 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 AMZ1Q400G9 498 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 MMEL1Q495T6 779 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 C9orf57Q5W0N0 161 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 RHBDF2Q6PJF5 856 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 PRSS57Q6UWY2 283 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 C18orf65Q6ZTR6 163 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 ARMC9Q7Z3E5 817 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 SLC35F3Q8IY50 421 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 DCP1BQ8IZD4 617 aaKnown RBP2.91□□□□□ -1.94
RIF1-212ENST00000498041 ZNF114Q8NC26 417 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 NAXEQ8NCW5 288 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 ZUFSPQ96AP4 578 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 PPM1MQ96MI6 270 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 DUX5Q96PT3 197 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 SLITRK1Q96PX8 696 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 OR1F2PQ96R84 312 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 NR1H4Q96RI1 486 aaPredicted RBP2.91□□□□□ -1.94
RIF1-212ENST00000498041 GLIS2Q9BZE0 524 aaPredicted RBP2.91□□□□□ -1.94
RIF1-212ENST00000498041 RCOR1Q9UKL0 485 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 PROCRQ9UNN8 238 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 CAMK2AQ9UQM7 478 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 NAALADL1Q9UQQ1 740 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 SNX9Q9Y5X1 595 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 ZMYM4Q5VZL5 1548 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 LMTK2Q8IWU2 1503 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 ADAMTS13Q76LX8 1427 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 ADAMTSL3P82987 1691 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 KDM3AQ9Y4C1 1321 aa2.91□□□□□ -1.94
RIF1-212ENST00000498041 UNC79Q9P2D8 2635 aa2.9□□□□□ -1.94
RIF1-212ENST00000498041 CD163L1Q9NR16 1453 aa2.9□□□□□ -1.94
RIF1-212ENST00000498041 USP32Q8NFA0 1604 aa2.9□□□□□ -1.94
RIF1-212ENST00000498041 KANK1Q14678 1352 aa2.9□□□□□ -1.94
RIF1-212ENST00000498041 TNRQ92752 1358 aa2.9□□□□□ -1.94
RIF1-212ENST00000498041 RGPD5Q99666 1765 aa2.9□□□□□ -1.94
RIF1-212ENST00000498041 ARHGEF40Q8TER5 1519 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 TMEM202A6NGA9 273 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 SRRM3A6NNA2 597 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 PRSS44E7EML9 344 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 EPHA8P29322 1005 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 CDAP32320 146 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 COMPP49747 757 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 GAS1P54826 345 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 RRP1P56182 461 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 DLG1Q12959 904 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 SF3B4Q15427 424 aaKnown RBP eCLIP2.9□□□□□ -1.95
RIF1-212ENST00000498041 C20orf194Q5TEA3 1177 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 ANKRD54Q6NXT1 300 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 SPSB3Q6PJ21 355 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 FBXO46Q6PJ61 603 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 LCTLQ6UWM7 567 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 B3GNT6Q6ZMB0 384 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 MTSS1LQ765P7 747 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 ZBTB2Q8N680 514 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 CADM4Q8NFZ8 388 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 LILRB1Q8NHL6 650 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 HUS1BQ8NHY5 278 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 CREB3L4Q8TEY5 395 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 PABPC5Q96DU9 382 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 SCMH1Q96GD3 660 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 ADGRG7Q96K78 797 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 KXD1Q9BQD3 176 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 THUMPD2Q9BTF0 503 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 C1QTNF4Q9BXJ3 329 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 PDCL3Q9H2J4 239 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 ESRP2Q9H6T0 727 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 GAREM1Q9H706 876 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 DDX31Q9H8H2 851 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 C17orf75Q9HAS0 396 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 MKKSQ9NPJ1 570 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 TAS2R10Q9NYW0 307 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 SMARCAL1Q9NZC9 954 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 SLC9A2Q9UBY0 812 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 FBXO9Q9UK97 447 aaPredicted RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 STON1Q9Y6Q2 735 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 MAP2P11137 1827 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 XIRP1Q702N8 1843 aaKnown RBP2.9□□□□□ -1.95
RIF1-212ENST00000498041 CFAP74Q9C0B2 1584 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 NRXN1Q9ULB1 1477 aa2.9□□□□□ -1.95
RIF1-212ENST00000498041 GPRASP1Q5JY77 1395 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 A0A1W2PPH5 198 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 PLSCR5A0PG75 271 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 MAGEA13PA6NCF6 341 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SMTNL1A8MU46 457 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 IFNL4K9M1U5 179 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SLC16A5O15375 505 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 NDUFS7O75251 213 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 PIK3C2GO75747 1445 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SEC31AO94979 1220 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 ZFYVE9O95405 1425 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms