RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 SHC4Q6S5L8 630 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 BPHLQ86WA6 291 aaPredicted RBP11.62□□□□□ -0.55
ATG3-209ENST00000496423 SFRP1Q8N474 314 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 ZADH2Q8N4Q0 377 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 LZTR1Q8N653 840 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 ARFGAP1Q8N6T3 406 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 SLC37A2Q8TED4 501 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 C9orf72Q96LT7 481 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 BARD1Q99728 777 aaKnown RBP11.62□□□□□ -0.55
ATG3-209ENST00000496423 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
ATG3-209ENST00000496423 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATG3-209ENST00000496423 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 TSPAN11A1L157 253 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 PRICKLE3O43900 615 aaPredicted RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 RAMP2O60895 175 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 RASSF9O75901 435 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 TMCC1O94876 653 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 LETM1O95202 739 aaPredicted RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 KRT5P13647 590 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 SULT1E1P49888 294 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 SEPHS1P49903 392 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 SLC6A3Q01959 620 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 NFATC2Q13469 925 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 LRP8Q14114 963 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 KYNUQ16719 465 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 ZNF630Q2M218 657 aaPredicted RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 HGSNATQ68CP4 663 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 MTFR2Q6P444 385 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 LIPIQ6XZB0 460 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 LEKR1Q6ZMV7 388 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 BNC2Q6ZN30 1099 aaPredicted RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 KCNMB4Q86W47 210 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 GRAMD1CQ8IYS0 662 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 ZNF606Q8WXB4 792 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 PGAP3Q96FM1 320 aaPredicted RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 OR2M4Q96R27 311 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 REPIN1Q9BWE0 567 aaKnown RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 TEX101Q9BY14 249 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 FRMD8Q9BZ67 464 aaPredicted RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
ATG3-209ENST00000496423 MAPK8IP1Q9UQF2 711 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 SNX10Q9Y5X0 201 aa11.61□□□□□ -0.55
ATG3-209ENST00000496423 MN1Q10571 1320 aaPredicted RBP11.6□□□□□ -0.55
ATG3-209ENST00000496423 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 FER1L5A0AVI2 2057 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 OR5K4A6NMS3 321 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 CALCAP01258 141 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 KLK3P07288 261 aaPredicted RBP11.6□□□□□ -0.55
ATG3-209ENST00000496423 STSP08842 583 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 SERPINA4P29622 427 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 VAV2P52735 878 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
ATG3-209ENST00000496423 GCNT1Q02742 428 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 TAOK1Q7L7X3 1001 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 SLC26A9Q7LBE3 791 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 ZDHHC17Q8IUH5 632 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 CHTF18Q8WVB6 975 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 NUS1Q96E22 293 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 RNF31Q96EP0 1072 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 TUBGCP5Q96RT8 1024 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 NPY6RQ99463 290 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 TRIM8Q9BZR9 551 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 ZNF212Q9UDV6 495 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 DNAI1Q9UI46 699 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 RARRES3Q9UL19 164 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 SNX7Q9UNH6 387 aa11.6□□□□□ -0.55
ATG3-209ENST00000496423 FAM221AA4D161 298 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 GOLGA6CA6NDK9 693 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 GOLGA6BA6NDN3 693 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 PIGNO95427 931 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 YEATS4O95619 227 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 IGHEP01854 428 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 C9P02748 559 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 FUCA1P04066 466 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 GOLGA6DP0CG33 693 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 RHOQP17081 205 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 AMD1P17707 334 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 GNA15P30679 374 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 SH3BP2P78314 561 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 RWDD4Q6NW29 188 aaKnown RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 FAM199XQ6PEV8 388 aaPredicted RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 IGFL3Q6UXB1 125 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 ZNF808Q8N4W9 903 aaPredicted RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 C1orf131Q8NDD1 294 aaKnown RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 ZNF397Q8NF99 534 aaPredicted RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 COG1Q8WTW3 980 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 RELTQ969Z4 430 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 VOPP1Q96AW1 172 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 INTS4Q96HW7 963 aaKnown RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 ATP13A3Q9H7F0 1226 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 GOLGA6AQ9NYA3 693 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 ARMCX3Q9UH62 379 aaPredicted RBP11.59□□□□□ -0.55
ATG3-209ENST00000496423 SLC17A4Q9Y2C5 497 aa11.59□□□□□ -0.55
ATG3-209ENST00000496423 POLEQ07864 2286 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms