RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 LRRN4Q8WUT4 740 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 RNF25Q96BH1 459 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 IMP4Q96G21 291 aaKnown RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 CALR3Q96L12 384 aaKnown RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 ZNF578Q96N58 590 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 HYOU1Q9Y4L1 999 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 AHCTF1Q8WYP5 2266 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 SMG1Q96Q15 3661 aaKnown RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 RGSL1A5PLK6 1076 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 B4DGG1 531 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 NTN3O00634 580 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 RRP8O43159 456 aaKnown RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 MTSS1O43312 755 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 TLX3O43711 291 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 NUDT21O43809 227 aaKnown RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 NOBOXO60393 691 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 MPOP05164 745 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 PNLIPP16233 465 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 EIF2S3P41091 472 aaKnown RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 MLLT3P42568 568 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 ABCG1P45844 678 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 PCBP4P57723 403 aaKnown RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 ERVPABLB-1P60509 514 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 DYNLT1P63172 113 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 HLTFQ14527 1009 aaKnown RBP eCLIP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 PTPRRQ15256 657 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 TFDP3Q5H9I0 405 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 OGFOD3Q6PK18 319 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 NT5DC3Q86UY8 548 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 FAM46DQ8NEK8 389 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 FGF11Q92914 225 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 SCARF2Q96GP6 870 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-213ENST00000496347 DCBLD2Q96PD2 775 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 SLC25A51Q9H1U9 297 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 ABCG8Q9H221 673 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 PKD2L2Q9NZM6 624 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 CD84Q9UIB8 345 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 MOSPD1Q9UJG1 213 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 APPL1Q9UKG1 709 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 SUFUQ9UMX1 484 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 PCDHGA8Q9Y5G5 932 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 PCDHA13Q9Y5I0 950 aa15.66■□□□□ 0.1
HDAC4-213ENST00000496347 ANKRD66B4E2M5 251 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 TNNT1P13805 278 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 GNPDA1P46926 289 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 DCDC1P59894 354 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 EIF3IQ13347 325 aaKnown RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 LRP8Q14114 963 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 PPP2R5EQ16537 467 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 QPCTQ16769 361 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 COL28A1Q2UY09 1125 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 HENMT1Q5T8I9 393 aaKnown RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 NPNTQ6UXI9 565 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 SPOCD1Q6ZMY3 1216 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 LRRC69Q6ZNQ3 347 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 CCNJLQ8IV13 435 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 CCHCR1Q8TD31 782 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 TFB1MQ8WVM0 346 aaKnown RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 SCAMP4Q969E2 229 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 TADA1Q96BN2 335 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 ATXN7L3BQ96GX2 97 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 LIN37Q96GY3 246 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 RBM41Q96IZ5 413 aaKnown RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 HIC2Q96JB3 615 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 AGAP3Q96P47 875 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 SMIM14Q96QK8 99 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 OR2M4Q96R27 311 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 TRIB3Q96RU7 358 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 MLPHQ9BV36 600 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 DPEP2Q9H4A9 486 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 SYNDIG1Q9H7V2 258 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 THSD1Q9NS62 852 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 SEPT10Q9P0V9 454 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 VPS18Q9P253 973 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 NFKBIL1Q9UBC1 381 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-213ENST00000496347 RABGEF1Q9UJ41 708 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 ENTPD2Q9Y5L3 495 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 ALG6Q9Y672 507 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 MGAQ8IWI9 3026 aa15.65■□□□□ 0.1
HDAC4-213ENST00000496347 A0A0U1RQS6 177 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 TMX2-CTNND1H3BSU7 103 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 CST8O60676 142 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 NDUFA10O95299 355 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 RPLP0P05388 317 aaKnown RBP15.64■□□□□ 0.09
HDAC4-213ENST00000496347 SPINT3P49223 89 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 C3orf38Q5JPI3 329 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 DOK6Q6PKX4 331 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 C19orf48Q6RUI8 117 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 RFLNAQ6ZTI6 216 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 ZNF438Q7Z4V0 828 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 SPRED1Q7Z699 444 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 TMTC1Q8IUR5 882 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 EXD1Q8NHP7 514 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 CCL4L1Q8NHW4 92 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 P3H4Q92791 437 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 COX14Q96I36 57 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 GFM1Q96RP9 751 aaKnown RBP15.64■□□□□ 0.09
HDAC4-213ENST00000496347 SRPK1Q96SB4 655 aaKnown RBP15.64■□□□□ 0.09
HDAC4-213ENST00000496347 RIOK2Q9BVS4 552 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms