RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TLE3Q04726 772 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 HLTFQ14527 1009 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 IHHQ14623 411 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 PDK1Q15118 436 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 RFLNAQ6ZTI6 216 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 GPR155Q7Z3F1 870 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 NRROSQ86YC3 692 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 CCNJLQ8IV13 435 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 FBXO39Q8N4B4 442 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 EXD1Q8NHP7 514 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 ZDHHC1Q8WTX9 485 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 KCNE4Q8WWG9 221 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 SCAMP4Q969E2 229 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 LIN37Q96GY3 246 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 SMIM14Q96QK8 99 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 MLPHQ9BV36 600 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 DDX56Q9NY93 547 aaKnown RBP12.7□□□□□ -0.38
PTPRF-214ENST00000496043 TAAR2Q9P1P5 351 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 SLC17A4Q9Y2C5 497 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 RNF215Q9Y6U7 377 aa12.7□□□□□ -0.38
PTPRF-214ENST00000496043 ZFYVE26Q68DK2 2539 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RP1P56715 2156 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 ANKRD36A6QL64 1941 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 CAPN8A6NHC0 703 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 C3orf70A6NLC5 250 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RHPN2P1A8MT19 583 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 ANKRD66B4E2M5 251 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 KCNK1O00180 336 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 KLK10O43240 276 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 ADCY8P40145 1251 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 CD86P42081 329 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 STC1P52823 247 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 UCNP55089 124 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 IFI35P80217 286 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 SKOR1P84550 965 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 CTBSQ01459 385 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 AP1B1Q10567 949 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 BIRC2Q13490 618 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 SLC9A4Q6AI14 798 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 DOK6Q6PKX4 331 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RFX6Q8HWS3 928 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 PLD5Q8N7P1 536 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 LPCAT1Q8NF37 534 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 FCRL3Q96P31 734 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 UBL7Q96S82 380 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
PTPRF-214ENST00000496043 ADGRE3Q9BY15 652 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 BRD8Q9H0E9 1235 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 TMEM98Q9Y2Y6 226 aa12.69□□□□□ -0.38
PTPRF-214ENST00000496043 RGSL1A5PLK6 1076 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 CDRT15L2A8MXV6 281 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 D6RAR5 112 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 PLD2O14939 933 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-214ENST00000496043 B4GAT1O43505 415 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 ASMTLO95671 621 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 ECEL1O95672 775 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 SOD1P00441 154 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 KRT1P04264 644 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 MMP2P08253 660 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 TNNT1P13805 278 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 AK4P27144 223 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-214ENST00000496043 CCKBRP32239 447 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 UGT1A5P35504 534 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 MAGEA1P43355 309 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 NOP2P46087 812 aaKnown RBP12.68□□□□□ -0.38
PTPRF-214ENST00000496043 PDX1P52945 283 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 CXADRP78310 365 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 B4GALNT1Q00973 533 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 TBX2Q13207 712 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-214ENST00000496043 QPCTQ16769 361 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 SLC30A9Q6PML9 568 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 SPRED1Q7Z699 444 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 B3GNT8Q7Z7M8 397 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 PIM3Q86V86 326 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 C17orf82Q86X59 251 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-214ENST00000496043 SFTPA2Q8IWL1 248 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 CNTD1Q8N815 330 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 TMEM159Q96B96 161 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 AGAP2Q99490 1192 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 FOXP3Q9BZS1 431 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 FAM83DQ9H4H8 585 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 PKD2L2Q9NZM6 624 aa12.68□□□□□ -0.38
PTPRF-214ENST00000496043 ATXN7L1Q9ULK2 861 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-214ENST00000496043 C1orf232A0A0U1RR37 186 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms