RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PCOLCE2Q9UKZ9 415 aa9.8□□□□□ -0.84
CALD1-223ENST00000496024 PNMA8BQ9ULN7 279 aaPredicted RBP9.8□□□□□ -0.84
CALD1-223ENST00000496024 AAR2Q9Y312 384 aaKnown RBP9.8□□□□□ -0.84
CALD1-223ENST00000496024 TOR1BO14657 336 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 ZNF185O15231 689 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 INPP4BO15327 924 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 FGF1P05230 155 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 ZSCAN5DPP0CG00 497 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 CEACAM1P13688 526 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
CALD1-223ENST00000496024 HLA-DPA1P20036 260 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 STIP1P31948 543 aaKnown RBP9.79□□□□□ -0.84
CALD1-223ENST00000496024 ADRA1AP35348 466 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 ACTN2P35609 894 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 TRIM23P36406 574 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 POLD2P49005 469 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 LMAN1P49257 510 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 TERF1P54274 439 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 KIAA1024LP59773 190 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 TRIP6Q15654 476 aaKnown RBP9.79□□□□□ -0.84
CALD1-223ENST00000496024 CCNG2Q16589 344 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 PARP6Q2NL67 630 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 ALG11Q2TAA5 492 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 PRRT3Q5FWE3 981 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 KCTD16Q68DU8 428 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 DBX2Q6ZNG2 339 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 GSTA5Q7RTV2 222 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 NRSN1Q8IZ57 195 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 SLC25A45Q8N413 288 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 CCDC89Q8N998 374 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 GLIS1Q8NBF1 620 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 ZNF548Q8NEK5 533 aaPredicted RBP9.79□□□□□ -0.84
CALD1-223ENST00000496024 OR56A4Q8NGH8 313 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 OR1E3Q8WZA6 343 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 EID2BQ96D98 161 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 PDXPQ96GD0 296 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 WDR24Q96S15 920 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 OSBPL9Q96SU4 736 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 TBL1YQ9BQ87 522 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 SPATA16Q9BXB7 569 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 AP1M1Q9BXS5 423 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 CYP4F12Q9HCS2 524 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 FGF22Q9HCT0 170 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 ARFGAP3Q9NP61 516 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 FTSJ1Q9UET6 329 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 TMEM98Q9Y2Y6 226 aa9.79□□□□□ -0.84
CALD1-223ENST00000496024 LRP4O75096 1905 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 ARHGEF17Q96PE2 2063 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 PGRMC1O00264 195 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 PDE2AO00408 941 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 TRIM38O00635 465 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 CBFA2T3O75081 653 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 RASGRP1O95267 797 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 ASMTLO95671 621 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 LDOC1O95751 146 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 SOD1P00441 154 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 TNFP01375 233 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 CELA2BP08218 269 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 MYCLP1P12525 358 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 CTSEP14091 401 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 BPIP17213 487 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 KELP23276 732 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 SRP54P61011 504 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 CDK3Q00526 305 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 DPTQ07507 201 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 PTPRCAPQ14761 206 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 TRIP13Q15645 432 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 DEFB133Q30KQ1 61 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 P3H1Q32P28 736 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 HS1BP3Q53T59 392 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 N4BP2L1Q5TBK1 243 aaPredicted RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 RANBP10Q6VN20 620 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 MARK2Q7KZI7 788 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 ZNF765Q7L2R6 523 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 KANSL1Q7Z3B3 1105 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 GLT6D1Q7Z4J2 308 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 TMC3Q7Z5M5 1100 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 TTC30BQ8N4P2 665 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 PDCD7Q8N8D1 485 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 PNPLA1Q8N8W4 532 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 PRELID2Q8N945 189 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 GPR26Q8NDV2 337 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 ATL2Q8NHH9 583 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 BTN2A2Q8WVV5 523 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 LRRC45Q96CN5 670 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 RTP4Q96DX8 246 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 CNDP2Q96KP4 475 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 CAPZA3Q96KX2 299 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 PPP1R2P1Q96PQ5 205 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 LRRC61Q9BV99 259 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 TEX101Q9BY14 249 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 ETNK1Q9HBU6 452 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 RAB6BQ9NRW1 208 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 PIH1D1Q9NWS0 290 aaKnown RBP9.78□□□□□ -0.84
CALD1-223ENST00000496024 HACD3Q9P035 362 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 SPASTQ9UBP0 616 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 SNX12Q9UMY4 172 aa9.78□□□□□ -0.84
CALD1-223ENST00000496024 ZKSCAN5Q9Y2L8 839 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms