RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LRRC45Q96CN5 670 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 SRPK1Q96SB4 655 aaKnown RBP19.36■□□□□ 0.69
HDAC4-212ENST00000495497 WDR26Q9H7D7 661 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 ERVMER34-1Q9H9K5 563 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 DNAJC28Q9NX36 388 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 HACD3Q9P035 362 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 KLF15Q9UIH9 416 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 PIEZO1Q92508 2521 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 CACNA1EQ15878 2313 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 TCRBV7S3A2A0A539 114 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 TMEM202A6NGA9 273 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 TOR1BO14657 336 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 SCAMP1O15126 338 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 SUN1O94901 812 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 HMGCLP35914 325 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 CCT8P50990 548 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 PTK2BQ14289 1009 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 NFATC4Q14934 902 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 HENMT1Q5T8I9 393 aaKnown RBP19.35■□□□□ 0.69
HDAC4-212ENST00000495497 C4orf22Q6V702 233 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 PPP1R21Q6ZMI0 780 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 TRIM74Q86UV6 250 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 PARGQ86W56 976 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 GATAD2AQ86YP4 633 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 RAVER1Q8IY67 606 aaKnown RBP19.35■□□□□ 0.69
HDAC4-212ENST00000495497 ZNF592Q92610 1267 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 TCEAL2Q9H3H9 227 aaPredicted RBP19.35■□□□□ 0.69
HDAC4-212ENST00000495497 IL17CQ9P0M4 197 aa19.35■□□□□ 0.69
HDAC4-212ENST00000495497 RGSL1A5PLK6 1076 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 ERI2A8K979 691 aaKnown RBP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 FADS2P1A8MWK0 482 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 CACNB4O00305 520 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 INPP4BO15327 924 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 CD59P13987 128 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 PTGIRP43119 386 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 RXRGP48443 463 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 KIAA1024LP59773 190 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 CDK3Q00526 305 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 POU6F1Q14863 301 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 TAF1AQ15573 450 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 CERCAMQ5T4B2 595 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 MACC1Q6ZN28 852 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 MICALCLQ6ZW33 695 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 LINC00523Q86TU6 105 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 NLRP8Q86W28 1048 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 RBFAQ8N0V3 343 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 DNAAF3Q8N9W5 541 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 BRSK1Q8TDC3 778 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 GRK7Q8WTQ7 553 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 TSACCQ96A04 125 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 SPATA16Q9BXB7 569 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 TEX101Q9BY14 249 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 MRPL40Q9NQ50 206 aaKnown RBP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 RNF14Q9UBS8 474 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 CDV3Q9UKY7 258 aaKnown RBP19.34■□□□□ 0.69
HDAC4-212ENST00000495497 CFAP54Q96N23 3096 aa19.34■□□□□ 0.69
HDAC4-212ENST00000495497 TMEM131Q92545 1883 aa19.33■□□□□ 0.69
HDAC4-212ENST00000495497 SLC30A4O14863 429 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 STX7O15400 261 aaKnown RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 DFNA5O60443 496 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 ECEL1O95672 775 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 CSF2P04141 144 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 LPOP22079 712 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 HTR1BP28222 390 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 TEAD1P28347 426 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 EPHA8P29322 1005 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 POLD2P49005 469 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 ARRB1P49407 418 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 TMPRSS15P98073 1019 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 CDH17Q12864 832 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 SEPT6Q14141 434 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 PPP1R7Q15435 360 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 ANKRD22Q5VYY1 191 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 DOK6Q6PKX4 331 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 ADAMTSL4Q6UY14 1074 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 RD3Q7Z3Z2 195 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 OXR1Q8N573 874 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 OR4K2Q8NGD2 314 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 OR13C4Q8NGS5 318 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 SAP25Q8TEE9 199 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 PTCD2Q8WV60 388 aaKnown RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 WDR92Q96MX6 357 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 ARFGAP3Q9NP61 516 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 CASS4Q9NQ75 786 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 PHPT1Q9NRX4 125 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 UCKL1Q9NWZ5 548 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 KLQ9UEF7 1012 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 PCYOX1Q9UHG3 505 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 FEZ2Q9UHY8 353 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 CNOT6Q9ULM6 557 aaKnown RBP19.33■□□□□ 0.68
HDAC4-212ENST00000495497 TMEM98Q9Y2Y6 226 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 KNL1Q8NG31 2342 aa19.33■□□□□ 0.68
HDAC4-212ENST00000495497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-212ENST00000495497 CCDC78A2IDD5 438 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 C2orf81A6NN90 581 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 CCL22O00626 93 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 LDB2O43679 373 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 GAS8O95995 478 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 HOXC4P09017 264 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms