RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PYCR2Q96C36 320 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 MYEOVQ96EZ4 313 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 LINGO1Q96FE5 620 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 SLC2A13Q96QE2 648 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 TNKS2Q9H2K2 1166 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 COL1A2P08123 1366 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 NBNO60934 754 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 ZNF865P0CJ78 1059 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 PSMA4P25789 261 aaKnown RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 SH3BP2P78314 561 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 ATP6AP1LQ52LC2 224 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 POTEHQ6S545 545 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 C11orf74Q86VG3 221 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 ARHGAP12Q8IWW6 846 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 FAM126BQ8IXS8 530 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 DCP1BQ8IZD4 617 aaKnown RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 PGAM4Q8N0Y7 254 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 KLQ9UEF7 1012 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 ZFP37Q9Y6Q3 630 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 PLOD2O00469 737 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 B4GAT1O43505 415 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 AHCYL1O43865 530 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 CCNCP24863 283 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ZNF177Q13360 481 aaPredicted RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 DGCR6Q14129 220 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ADGRE1Q14246 886 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 SLC22A15Q8IZD6 547 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 LINC01465Q8N7H1 131 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 RIN3Q8TB24 985 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 TCAF2A6NFQ2 919 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 MAGEB3O15480 346 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ARNTP27540 789 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ALDH4A1P30038 563 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ADSLP30566 484 aaPredicted RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 MC4RP32245 332 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 UFM1P61960 85 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 RAD51Q06609 339 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 HSPA14Q0VDF9 509 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ATP1A4Q13733 1029 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 TRIM25Q14258 630 aaKnown RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 MS4A13Q5J8X5 152 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ANKS6Q68DC2 871 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 DDI1Q8WTU0 396 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 APBB2Q92870 758 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ZFYVE28Q9HCC9 887 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 EIF2B3Q9NR50 452 aaKnown RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 OAZ3Q9UMX2 235 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 NOBOXO60393 691 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 GJB5O95377 273 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 CKMP06732 381 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 BMP1P13497 986 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 RHOAP61586 193 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 YBX1P67809 324 aaKnown RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 PHEXP78562 749 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 GRIK3Q13003 919 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 CDH18Q13634 790 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 BOP1Q14137 746 aaKnown RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 FRG1Q14331 258 aaKnown RBP13.42□□□□□ -0.26
GPC1-209ENST00000495100 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 SZRD1Q7Z422 152 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 GALNT10Q86SR1 603 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 DBF4BQ8NFT6 615 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 ACBD6Q9BR61 282 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 BEGAINQ9BUH8 593 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 SLC25A23Q9BV35 468 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 TAS2R13Q9NYV9 303 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 AASSQ9UDR5 926 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 LIMD1Q9UGP4 676 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 CD84Q9UIB8 345 aa13.42□□□□□ -0.26
GPC1-209ENST00000495100 DHRS12A0PJE2 317 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 MUSKO15146 869 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 ZNF682O95780 498 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 PYGLP06737 847 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 SBK3P0C264 359 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 HSPA7P48741 367 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 DGKEP52429 567 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 RPL38P63173 70 aaKnown RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 MAPRE2Q15555 327 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 RNF219Q5W0B1 726 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 UGT3A1Q6NUS8 523 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 GCNT7Q6ZNI0 430 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 CCDC117Q8IWD4 279 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 NR1H4Q96RI1 486 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 RERGLQ9H628 205 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 VTI1BQ9UEU0 232 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms