RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GRAMD1AQ96CP6 724 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 WDR24Q96S15 920 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 DNAJC7Q99615 494 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 CEP41Q9BYV8 373 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 SEMA4CQ9C0C4 833 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 POLR1EQ9GZS1 481 aaKnown RBP11.61□□□□□ -0.55
VTI1A-208ENST00000494728 DPEP2Q9H4A9 486 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 RDH14Q9HBH5 336 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 DTLQ9NZJ0 730 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 TAAR2Q9P1P5 351 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 LRIT1Q9P2V4 623 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 CHKBQ9Y259 395 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 TMEM98Q9Y2Y6 226 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 TEX51A0A1B0GUA7 166 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 A0A1W2PQ67 120 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 CAPN8A6NHC0 703 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 C3orf70A6NLC5 250 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-208ENST00000494728 KCNK1O00180 336 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 B4GAT1O43505 415 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ECEL1O95672 775 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 EML2O95834 649 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 SLC5A2P31639 672 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 CSF2RBP32927 897 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ADCY8P40145 1251 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 STC1P52823 247 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 OR1D5P58170 312 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 CTBSQ01459 385 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
VTI1A-208ENST00000494728 DPTQ07507 201 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ITKQ08881 620 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ARHGEF7Q14155 803 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 C16orf72Q14CZ0 275 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 KIAA1614Q5VZ46 1190 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ZNF574Q6ZN55 896 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-208ENST00000494728 USP45Q70EL2 814 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 RAB11FIP2Q7L804 512 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 ZNF438Q7Z4V0 828 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 BBS5Q8N3I7 341 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 CNTD1Q8N815 330 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 KCTD6Q8NC69 237 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 NSMCE1Q8WV22 266 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 PMEPA1Q969W9 287 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 AP2M1Q96CW1 435 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 SCARF2Q96GP6 870 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-208ENST00000494728 TSGA13Q96PP4 275 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 CHP1Q99653 195 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 NUDT22Q9BRQ3 303 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 SEMA6CQ9H3T2 930 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 SPTLC3Q9NUV7 552 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.55
VTI1A-208ENST00000494728 FOXJ2Q9P0K8 574 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 UVRAGQ9P2Y5 699 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 PISDQ9UG56 409 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 LOXL2Q9Y4K0 774 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 OAS3Q9Y6K5 1087 aaKnown RBP11.6□□□□□ -0.55
VTI1A-208ENST00000494728 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
VTI1A-208ENST00000494728 RELNP78509 3460 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 FADS2P1A8MWK0 482 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 PPM1DO15297 605 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 INPP4BO15327 924 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 EFSO43281 561 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 NUDT21O43809 227 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 CLDN7O95471 211 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 KRT10P13645 584 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 TEAD1P28347 426 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 MAN1A1P33908 653 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 GPR1P46091 355 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 NR1D2Q14995 579 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 HADHQ16836 314 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 NPNTQ6UXI9 565 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 ADAMTSL4Q6UY14 1074 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 B4GALNT4Q76KP1 1039 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 ZNF843Q8N446 348 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 FBXO39Q8N4B4 442 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 ARL14Q8N4G2 192 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 LPCAT1Q8NF37 534 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 ZDHHC1Q8WTX9 485 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 SNRNP27Q8WVK2 155 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 CTNNBL1Q8WYA6 563 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 TTC9Q92623 222 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 FATE1Q969F0 183 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 EID2BQ96D98 161 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 HDAC11Q96DB2 347 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 COX14Q96I36 57 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 RNF157Q96PX1 679 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 RIOK2Q9BVS4 552 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 DPH1Q9BZG8 443 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 TRNAU1APQ9NX07 287 aaKnown RBP11.59□□□□□ -0.55
VTI1A-208ENST00000494728 HYOU1Q9Y4L1 999 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
VTI1A-208ENST00000494728 PRAMEF33A0A0G2JMD5 474 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 LRRD1A4D1F6 860 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 K7ENP7 123 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PRAMEF10O60809 474 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 MFAP3LO75121 409 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 ATP1A1P05023 1023 aaKnown RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 IVLP07476 585 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms