RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 FADS2P1A8MWK0 482 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 MTX2O75431 263 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 ECEL1O95672 775 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 SOD1P00441 154 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 EPOP01588 193 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 BPIP17213 487 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 FDFT1P37268 417 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 RABIFP47224 123 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 POLD2P49005 469 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 LMNB2Q03252 620 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 RSPO4Q2I0M5 234 aaPredicted RBP11.08□□□□□ -0.63
APTX-230ENST00000494649 CERCAMQ5T4B2 595 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 ANKRD22Q5VYY1 191 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 ESRP1Q6NXG1 681 aaKnown RBP11.08□□□□□ -0.63
APTX-230ENST00000494649 FAM151BQ6UXP7 276 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 MARK2Q7KZI7 788 aaKnown RBP11.08□□□□□ -0.63
APTX-230ENST00000494649 TMC3Q7Z5M5 1100 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 OR13C4Q8NGS5 318 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 PDXPQ96GD0 296 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 KRT12Q99456 494 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 ELF4Q99607 663 aaPredicted RBP11.08□□□□□ -0.63
APTX-230ENST00000494649 TRIM51Q9BSJ1 452 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 TRIM31Q9BZY9 425 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 FAM83DQ9H4H8 585 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 WDR26Q9H7D7 661 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 TM7SF3Q9NS93 570 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.63
APTX-230ENST00000494649 SPTY2D1-AS1A0A0U1RR47 76 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 PSMD11O00231 422 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 CER1O95813 267 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 SESN2P58004 480 aaPredicted RBP11.08□□□□□ -0.64
APTX-230ENST00000494649 C1orf61Q13536 156 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 SEMA5AQ13591 1074 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 SHBQ15464 509 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 TTC30BQ8N4P2 665 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 OR4K2Q8NGD2 314 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 ASB12Q8WXK4 309 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 UCKL1Q9NWZ5 548 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
APTX-230ENST00000494649 ASIC3Q9UHC3 531 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 CDV3Q9UKY7 258 aaKnown RBP11.08□□□□□ -0.64
APTX-230ENST00000494649 MYLKQ15746 1914 aa11.08□□□□□ -0.64
APTX-230ENST00000494649 FFAR2O15552 330 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 TTI1O43156 1089 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 AVILO75366 819 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 ZNF189O75820 626 aaPredicted RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 CA5AP35218 305 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 HMGCLP35914 325 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 FNTAP49354 379 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 CDK3Q00526 305 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 EIF2B5Q13144 721 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 MSLNQ13421 630 aaPredicted RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 IQCHQ86VS3 1027 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 ZSCAN30Q86W11 494 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 PARGQ86W56 976 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 HID1Q8IV36 788 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 FGF22Q9HCT0 170 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 BTBD3Q9Y2F9 522 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 PRKAB1Q9Y478 270 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 CABIN1Q9Y6J0 2220 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 DCDC2BA2VCK2 349 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 CACNB4O00305 520 aaPredicted RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 STX7O15400 261 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A9O60656 530 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 TMEM63AO94886 807 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 ASMTLO95671 621 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 GAS8O95995 478 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 CELA2BP08218 269 aaPredicted RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 TSHRP16473 764 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 JUNDP17535 347 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A6P19224 532 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A1P22309 533 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A4P22310 534 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A3P35503 534 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A5P35504 534 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 ADCY8P40145 1251 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 DR1Q01658 176 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 OVGP1Q12889 678 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 NFATC4Q14934 902 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 AGERQ15109 404 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 HENMT1Q5T8I9 393 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 IL27RAQ6UWB1 636 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 SETD7Q8WTS6 366 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 DNAJC1Q96KC8 554 aaKnown RBP11.07□□□□□ -0.64
APTX-230ENST00000494649 ZNF778Q96MU6 729 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 PPP1R2P1Q96PQ5 205 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 ZDHHC5Q9C0B5 715 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 FAM96AQ9H5X1 160 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A7Q9HAW7 530 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A10Q9HAW8 530 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 UGT1A8Q9HAW9 530 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 IL26Q9NPH9 171 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 IL17CQ9P0M4 197 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
APTX-230ENST00000494649 NEU2Q9Y3R4 380 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms