RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ZNF805Q5CZA5 627 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 TXNRD3NBQ6F5E7 133 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 RFX8Q6ZV50 586 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 PTRH1Q86Y79 214 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 SGF29Q96ES7 293 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 RNF157Q96PX1 679 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 GFM1Q96RP9 751 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 KCTD15Q96SI1 283 aaPredicted RBP11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 ARHGAP9Q9BRR9 750 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 SLC13A1Q9BZW2 595 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 CEP44Q9C0F1 390 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 GPATCH2LQ9NWQ4 482 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 PPARGC1AQ9UBK2 798 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 OR1A2Q9Y585 309 aa11.8□□□□□ -0.52
CSNK1E-212ENST00000494610 D6RAR5 112 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 SUV39H1O43463 412 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 TSPAN6O43657 245 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 TIMP2P16035 220 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 RPIAP49247 311 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 MAPK10P53779 464 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 INHBCP55103 352 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 PPARDQ03181 441 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 KLF1Q13351 362 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 CYP1B1Q16678 543 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 MYLK3Q32MK0 819 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 ATP13A4Q4VNC1 1196 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 GLE1Q53GS7 698 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 KAZNQ674X7 775 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 SLC9A4Q6AI14 798 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 ESRP1Q6NXG1 681 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 TTC7BQ86TV6 843 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 LZTR1Q8N653 840 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 FAM174AQ8TBP5 190 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 BTN2A2Q8WVV5 523 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 P3H4Q92791 437 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 PMEPA1Q969W9 287 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 LIN37Q96GY3 246 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 MS4A14Q96JA4 679 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 ZYG11BQ9C0D3 744 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 NCKIPSDQ9NZQ3 722 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 GPR34Q9UPC5 381 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 LOXL2Q9Y4K0 774 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-212ENST00000494610 USP9XQ93008 2570 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CFAP69A5D8W1 941 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 C9orf172C9J069 976 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 NDC80O14777 642 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 PPP1R12AO14974 1030 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CST8O60676 142 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 LRIG2O94898 1065 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 PIGNO95427 931 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 GAS8O95995 478 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 MX2P20592 715 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 EPHB2P29323 1055 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 MAPKAPK2P49137 400 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 HK3P52790 923 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 DPYSQ14117 519 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 DHX34Q14147 1143 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 PTK2BQ14289 1009 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CCNG2Q16589 344 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CA9Q16790 459 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 WSCD2Q2TBF2 565 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 MANEALQ5VSG8 457 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 RWDD4Q6NW29 188 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 C8orf74Q6P047 294 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 ENPP7Q6UWV6 458 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 GDPD4Q6W3E5 623 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 MACC1Q6ZN28 852 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 SYDE1Q6ZW31 735 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 MAATS1Q7Z4T9 603 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 ARL10Q8N8L6 244 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 PLA2G15Q8NCC3 412 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 DENND6BQ8NEG7 585 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 OR2AP1Q8NGE2 309 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CCL4L1Q8NHW4 92 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CCHCR1Q8TD31 782 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 GLMNQ92990 594 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 USP7Q93009 1102 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 NAT6Q93015 286 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 GRAMD1AQ96CP6 724 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 PDXPQ96GD0 296 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 EXOC2Q96KP1 924 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 BRD8Q9H0E9 1235 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 SEMA6CQ9H3T2 930 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 LRRN3Q9H3W5 708 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 MRPL40Q9NQ50 206 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 CWC15Q9P013 229 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 PCDHGA7Q9Y5G6 932 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms