RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 MDM1Q8TC05 714 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 GLMNQ92990 594 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 PDXPQ96GD0 296 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.34e-6■□□□□ 11.3
ERCC3-209ENST00000494464 NAP1L3Q99457 506 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 FGF22Q9HCT0 170 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 SMARCAL1Q9NZC9 954 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 RPL26L1Q9UNX3 145 aaKnown RBP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CLCA2Q9UQC9 943 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TTLL3Q9Y4R7 772 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 HEY1Q9Y5J3 304 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ZFHX4Q86UP3 3567 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 CAPN8A6NHC0 703 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 KCNK1O00180 336 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 TAF4O00268 1085 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 PPP1R12AO14974 1030 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 YY2O15391 372 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 OPA1O60313 960 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 CTSEP14091 401 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 CDKN2BP42772 138 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 RPIAP49247 311 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 ZBTB17Q13105 803 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 TARDBPQ13148 414 aaKnown RBP eCLIP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 C1orf61Q13536 156 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 PDK1Q15118 436 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 NR0B2Q15466 257 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 ODF2Q5BJF6 829 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 CDCP2Q5VXM1 449 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 C8orf74Q6P047 294 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 MFSD7Q6UXD7 560 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 HSD11B1LQ7Z5J1 315 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 RAVER1Q8IY67 606 aaKnown RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 OR56A4Q8NGH8 313 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 IFI44Q8TCB0 444 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 NAT6Q93015 286 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 TSACCQ96A04 125 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 LYSMD1Q96S90 227 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 LGMNQ99538 433 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
ERCC3-209ENST00000494464 BRD8Q9H0E9 1235 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
ERCC3-209ENST00000494464 GOLGA4Q13439 2230 aaKnown RBP13.17□□□□□ -0.3
ERCC3-209ENST00000494464 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 PRLP01236 227 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 TNFP01375 233 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 CELA2BP08218 269 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-209ENST00000494464 MYF5P13349 255 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 CTPS1P17812 591 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 ETV3P41162 512 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 NR2C2P49116 596 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 EPHB1P54762 984 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 DPTQ07507 201 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 NIPAL4Q0D2K0 466 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 TFDP2Q14188 446 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 RTP5Q14D33 572 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 SLC14A2Q15849 920 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 PPP2R5EQ16537 467 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 MAP9Q49MG5 647 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 LRRC66Q68CR7 880 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 ZNF765Q7L2R6 523 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 EFL1Q7Z2Z2 1120 aaKnown RBP13.17□□□□□ -0.3
ERCC3-209ENST00000494464 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 GKN2Q86XP6 184 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 SLC35F3Q8IY50 421 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 CNTD1Q8N815 330 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 ARL10Q8N8L6 244 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 SCG3Q8WXD2 468 aaKnown RBP13.17□□□□□ -0.3
ERCC3-209ENST00000494464 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 ALG3Q92685 438 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-209ENST00000494464 TEX101Q9BY14 249 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 NRSN2Q9GZP1 204 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 PHPT1Q9NRX4 125 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-209ENST00000494464 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
ERCC3-209ENST00000494464 MT-CO3P00414 261 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 JCHAINP01591 159 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 MMP2P08253 660 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 TGM2P21980 687 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 STC1P52823 247 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 SKOR1P84550 965 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 CDK3Q00526 305 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 AP1B1Q10567 949 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 CDKN3Q16667 212 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 DENND2CQ68D51 928 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 KCTD16Q68DU8 428 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 CRTC1Q6UUV9 634 aa13.16□□□□□ -0.3
ERCC3-209ENST00000494464 NPNTQ6UXI9 565 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms