RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 VIMP08670 466 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 BMP1P13497 986 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TIMP2P16035 220 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ALOX15P16050 662 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 ZNF30P17039 623 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 BPIP17213 487 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 LHCGRP22888 699 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ALDH3A1P30838 453 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ARRB2P32121 409 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 GKP32189 559 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 GJA4P35212 333 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ABL2P42684 1182 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 PTGER3P43115 390 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TTPAP49638 278 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 NUMBP49757 651 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 CDKN2DP55273 166 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 IRF9Q00978 393 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 CACNG1Q06432 222 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 BST1Q10588 318 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ACAP2Q15057 778 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 HNRNPA1L2Q32P51 320 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 GALNTL6Q49A17 601 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 LACTB2Q53H82 288 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 FASTKD1Q53R41 847 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 C9orf64Q5T6V5 341 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 GRAMD4Q6IC98 578 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 C16orf46Q6P387 395 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 GDPD4Q6W3E5 623 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ZYG11AQ6WRX3 759 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ATG14Q6ZNE5 492 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 MICALCLQ6ZW33 695 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 LYSMD3Q7Z3D4 306 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 SNX20Q7Z614 316 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TECPR1Q7Z6L1 1165 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ISCA2Q86U28 154 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 SLC41A1Q8IVJ1 513 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 SUGP1Q8IWZ8 645 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 FSTL5Q8N475 847 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 NAT16Q8N8M0 369 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TERB1Q8NA31 727 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 CHST14Q8NCH0 376 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 ARMC2Q8NEN0 867 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 OR6P1Q8NGX9 317 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 RHEBL1Q8TAI7 183 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 LRRC8CQ8TDW0 803 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 DYDC1Q8WWB3 177 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 KCNJ9Q92806 393 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 FAM131CQ96AQ9 280 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TSPAN17Q96FV3 270 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 RIPOR3Q96MK2 946 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 NECTIN4Q96NY8 510 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 PLEKHG4BQ96PX9 1271 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 FAM129BQ96TA1 746 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 MRPL57Q9BQC6 102 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 PLCD4Q9BRC7 762 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 PITPNM3Q9BZ71 974 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 C20orf27Q9GZN8 174 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 NSRP1Q9H0G5 558 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 CDH19Q9H159 772 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TNKS2Q9H2K2 1166 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TTYH1Q9H313 450 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 EBF3Q9H4W6 596 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 IGFLR1Q9H665 355 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 NMRAL1Q9HBL8 299 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 FBXO6Q9NRD1 293 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 THAP1Q9NVV9 213 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 SMOXQ9NWM0 555 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 KLHL14Q9P2G3 628 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 DEC1Q9P2X7 70 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 THAP10Q9P2Z0 257 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 CDH22Q9UJ99 828 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 APPL1Q9UKG1 709 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 TLK1Q9UKI8 766 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 USP15Q9Y4E8 981 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 DENND4AQ7Z401 1863 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 PDE4DIPQ5VU43 2346 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CCDC78A2IDD5 438 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 NPIPB15A6NHN6 443 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 H0Y858 1186 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CCL22O00626 93 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ZNF195O14628 629 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 AREL1O15033 823 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PHGDHO43175 533 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 SPINT1O43278 529 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 BUD23O43709 281 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 KLK8O60259 260 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 TRIM13O60858 407 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 H2AFYO75367 372 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 LEFTY1O75610 366 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SRP72O76094 671 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 SNUPNO95149 360 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 CLDN7O95471 211 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 TSPAN12O95859 305 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ESR1P03372 595 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SERPINE1P05121 402 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 F7P08709 466 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 ALPIP09923 528 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CPA3P15088 417 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms